HHsearch alignment for GI: 254780229 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=96.24 E-value=0.038 Score=37.37 Aligned_cols=34 Identities=18% Similarity=0.318 Sum_probs=21.6
Q ss_pred HHHHHH-HHCCCCE-EEECCCCCCCHHHHHHHHHHHH
Q ss_conf 999998-5148955-9942878770389999999999
Q gi|254780229|r 410 HSAVID-VINGKNL-IIEGPPGTGKSQTITNIIAAAM 444 (1775)
Q Consensus 410 ~~av~~-~~~g~~~-vi~GPPGTGKSQTIaNlIa~~l 444 (1775)
T Consensus 32 l~~L~~~l~~~~g~~lltGe~GtGKT-tllr~l~~~l 67 (269)
T TIGR03015 32 MAYLEYGLSQREGFILITGEVGAGKT-TLIRNLLKRL 67 (269)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCHH-HHHHHHHHHC
T ss_conf 99999999648965999729989889-9999999845