HHsearch alignment for GI: 254780229 and conserved domain: TIGR03185
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD. This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.
Probab=95.91 E-value=0.17 Score=30.44 Aligned_cols=32 Identities=34% Similarity=0.589 Sum_probs=27.3
Q ss_pred CCCCEE-EECCCCCCCHHHHHHHHHHHHHCCCEEE
Q ss_conf 489559-9428787703899999999996798289
Q gi|254780229|r 418 NGKNLI-IEGPPGTGKSQTITNIIAAAMLHGKKIL 451 (1775)
Q Consensus 418 ~g~~~v-i~GPPGTGKSQTIaNlIa~~la~Gk~VL 451 (1775)
T Consensus 26 ~~k~i~li~G~NG~GKT-Tll~Ai~~~LY-G~~~~ 58 (650)
T TIGR03185 26 SPKPIILIGGLNGAGKT-TLLDAIQLGLY-GKRAY 58 (650)
T ss_pred CCCCEEEEECCCCCCHH-HHHHHHHHHHC-CCCCC
T ss_conf 99987999779999789-99999999956-95100