HHsearch alignment for GI: 254780229 and conserved domain: cd00046
>cd00046 DEXDc DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Probab=97.06 E-value=0.0043 Score=47.18 Aligned_cols=63 Identities=21% Similarity=0.217 Sum_probs=48.4
Q ss_pred CCEEEECCCCCCCHHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHHCCC-CCEEEECCCC
Q ss_conf 95599428787703899999999996--798289960105899999986443584-4136540266
Q gi|254780229|r 420 KNLIIEGPPGTGKSQTITNIIAAAML--HGKKILFCAQKMAAIEVVRHRLEKAGL-GEFCLELHSH 482 (1775)
Q Consensus 420 ~~~vi~GPPGTGKSQTIaNlIa~~la--~Gk~VLfVaeK~aALdVV~~RL~~~gL-g~~cleLHs~ 482 (1775)
T Consensus 1 ~~~lv~~ptGsGKT~~~~~~~~~~~~~~~~~~~lil~Pt~~L~~q~~~~~~~~~~~~~~~~~~~~~ 66 (144)
T cd00046 1 RDVLLAAPTGSGKTLAALLPILELLDSLKGGQVLVLAPTRELANQVAERLKELFGEGIKVGYLIGG 66 (144)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 999998899717999999999999975689769997467999999999999974887179999613