HHsearch alignment for GI: 254780229 and conserved domain: cd00464
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.
Probab=94.91 E-value=0.025 Score=39.19 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=21.8
Q ss_pred CEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 5599428787703899999999996
Q gi|254780229|r 421 NLIIEGPPGTGKSQTITNIIAAAML 445 (1775)
Q Consensus 421 ~~vi~GPPGTGKSQTIaNlIa~~la 445 (1775)
T Consensus 1 nI~LiG~~G~GKs-tigk~la~~l~ 24 (154)
T cd00464 1 NIVLIGMMGAGKT-TVGRLLAKALG 24 (154)
T ss_pred CEEEECCCCCCHH-HHHHHHHHHHC
T ss_conf 9899889999889-99999999979