HHsearch alignment for GI: 254780229 and conserved domain: cd01129
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP). It is responsible for the export the majority of Gram-negative bacterial exoenzymes and toxins. PulE is a cytoplasmic protein of the GSP, which contains an ATP binding site and a tetracysteine motif. This subgroup also includes PillB and HofB.
Probab=96.20 E-value=0.015 Score=41.59 Aligned_cols=49 Identities=16% Similarity=0.365 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHHCCC-CE-EEECCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 346899999851489-55-99428787703899999999996798289960
Q gi|254780229|r 406 DSSQHSAVIDVINGK-NL-IIEGPPGTGKSQTITNIIAAAMLHGKKILFCA 454 (1775)
Q Consensus 406 DsSQ~~av~~~~~g~-~~-vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfVa 454 (1775)
T Consensus 65 ~~~~~~~l~~~~~~~~GlilitGptGSGKtTtl~a~l~~~~~~~~~i~tiE 115 (264)
T cd01129 65 KPENLEIFRKLLEKPHGIILVTGPTGSGKTTTLYSALSELNTPEKNIITVE 115 (264)
T ss_pred CHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 999999999997089988999789999779999999986436885089986