HHsearch alignment for GI: 254780229 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=94.18 E-value=0.036 Score=37.59 Aligned_cols=37 Identities=30% Similarity=0.588 Sum_probs=31.0
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHHC-CCEEEE
Q ss_conf 85148955994287877038999999999967-982899
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAMLH-GKKILF 452 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la~-Gk~VLf 452 (1775)
T Consensus 22 ~i~~Ge~~~l~G~NGsGKS-TLlk~i~Gl~~p~sG~i~~ 59 (201)
T cd03231 22 TLAAGEALQVTGPNGSGKT-TLLRILAGLSPPLAGRVLL 59 (201)
T ss_pred EECCCCEEEEECCCCCCHH-HHHHHHHCCCCCCCEEEEE
T ss_conf 8879959999999999999-9999996677888529999