HHsearch alignment for GI: 254780229 and conserved domain: cd03235
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=94.47 E-value=0.029 Score=38.57 Aligned_cols=38 Identities=34% Similarity=0.462 Sum_probs=31.0
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCEEEEE
Q ss_conf 8514895599428787703899999999996-79828996
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAML-HGKKILFC 453 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~Gk~VLfV 453 (1775)
T Consensus 21 ~i~~Ge~~~liGpNGaGKS-Tllk~i~Gl~~p~~G~i~i~ 59 (213)
T cd03235 21 EVKPGEFLAIVGPNGAGKS-TLLKAILGLLKPTSGSIRVF 59 (213)
T ss_pred EECCCCEEEEECCCCCCHH-HHHHHHHCCCCCCCCEEEEC
T ss_conf 9859989999999998699-99999976878897589999