HHsearch alignment for GI: 254780229 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.80 E-value=0.021 Score=40.05 Aligned_cols=52 Identities=23% Similarity=0.416 Sum_probs=35.0
Q ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHHHHHH-CCCEEEEEECCHH--HHHHHHHHH
Q ss_conf 8514895599428787703899999999996-7982899601058--999999864
Q gi|254780229|r 415 DVINGKNLIIEGPPGTGKSQTITNIIAAAML-HGKKILFCAQKMA--AIEVVRHRL 467 (1775)
Q Consensus 415 ~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la-~Gk~VLfVaeK~a--ALdVV~~RL 467 (1775)
T Consensus 25 ~i~~Ge~vaivG~sGsGKS-TLl~ll~gl~~p~~G~I~idg~~i~~~~~~~~r~~i 79 (229)
T cd03254 25 SIKPGETVAIVGPTGAGKT-TLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred EECCCCEEEEECCCCCHHH-HHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCE
T ss_conf 9879999999999998099-999999668667873899999995418999996328