HHsearch alignment for GI: 254780229 and conserved domain: pfam02223

>pfam02223 Thymidylate_kin Thymidylate kinase.
Probab=94.41  E-value=0.045  Score=36.50  Aligned_cols=32  Identities=28%  Similarity=0.544  Sum_probs=26.9

Q ss_pred             EECCCCCCCHHHHHHHHHHHH-HCCCEEEEEECC
Q ss_conf             942878770389999999999-679828996010
Q gi|254780229|r  424 IEGPPGTGKSQTITNIIAAAM-LHGKKILFCAQK  456 (1775)
Q Consensus       424 i~GPPGTGKSQTIaNlIa~~l-a~Gk~VLfVaeK  456 (1775)
T Consensus         1 ~EGiDGsGKs-Tq~~~L~~~L~~~g~~v~~~~ep   33 (186)
T pfam02223         1 IEGLDGAGKT-TQAELLKERLKEQGIKVVLTREP   33 (186)
T ss_pred             CCCCCCCCHH-HHHHHHHHHHHHCCCEEEEEECC
T ss_conf             9799998999-99999999999879908997499