HHsearch alignment for GI: 254780229 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=96.23  E-value=0.0031  Score=48.65  Aligned_cols=31  Identities=35%  Similarity=0.795  Sum_probs=24.4

Q ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEE
Q ss_conf             559942878770389999999999679828996
Q gi|254780229|r  421 NLIIEGPPGTGKSQTITNIIAAAMLHGKKILFC  453 (1775)
Q Consensus       421 ~~vi~GPPGTGKSQTIaNlIa~~la~Gk~VLfV  453 (1775)
T Consensus         1 ~vll~Gp~G~GKT-~la~~la~~l~-~~~~~~i   31 (139)
T pfam07728         1 GVLLVGPPGTGKS-ELAERLAAALS-NRPVFYV   31 (139)
T ss_pred             CEEEECCCCCHHH-HHHHHHHHHCC-CCCCHHH
T ss_conf             9899989975699-99999999807-9831112