HHsearch alignment for GI: 254780229 and conserved domain: pfam10881

Probab=97.18  E-value=0.0023  Score=49.98  Aligned_cols=88  Identities=20%  Similarity=0.239  Sum_probs=68.5

Q ss_pred             CCCCHHHHHHHHHHHH---CCCEEEECCCCC----------------------CEECCEEEECCCCCCCEEEEEECCCHH
Q ss_conf             6899899999999997---899897065757----------------------710125733689888317999745802
Q gi|254780229|r 1660 KQDSDFAVSVVNELEK---TGFACDSQLGDM----------------------GFSIDVVVRDPNNPGHYLMGIECDGAM 1714 (1775)
Q Consensus      1660 ~~ds~fe~~v~~~L~~---~G~~v~~qvg~~----------------------~~riDl~v~~p~~pg~~~l~iecDG~~ 1714 (1775)
T Consensus         3 ~llt~~E~~f~~~L~~al~~~~~V~~qV~l~dil~~~~~~~~~~~~~~~~~i~~k~~DFvi~d~~~-~~~v~~IEld~~~   81 (127)
T pfam10881         3 PLLNPAERAFLNALEEAVGDRYRVLAQVSLSDVLTVDPGVSKREWQRAFNRISAKHVDFVLCDKSD-LRPVAAIELDDAS   81 (127)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCC-CCEEEEEEECCCC
T ss_conf             888999999999999983878599976688895066677576789999998655066699997799-9489999946866


Q ss_pred             HCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHC
Q ss_conf             36832486777444899995699099932216411
Q gi|254780229|r 1715 YNSAKSARDRDRLRQEVLERMGWRIRRIWSVDWFS 1749 (1775)
Q Consensus      1715 yh~~~~ardrD~~Rq~vLe~~GW~~~Riws~dw~~ 1749 (1775)
T Consensus        82 -h~~~~~~~rD~~k~~~~~~agipllR~~~~~~y~  115 (127)
T pfam10881        82 -HKQGKAAKRDAFKRAALESAGIPLLRVKAKASYT  115 (127)
T ss_pred             -CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCC
T ss_conf             -5655278889999999998799789854777999