HHsearch alignment for GI: 254780229 and conserved domain: smart00488
>smart00488 DEXDc2 DEAD-like helicases superfamily.
Probab=96.99 E-value=0.0047 Score=46.75 Aligned_cols=63 Identities=24% Similarity=0.350 Sum_probs=39.4
Q ss_pred CCCHHHHHHHH----HHHCCCCEEEECCCCCCCHHHHHHHHHHHHH---------CCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 77346899999----8514895599428787703899999999996---------798289960105899999986443
Q gi|254780229|r 404 DSDSSQHSAVI----DVINGKNLIIEGPPGTGKSQTITNIIAAAML---------HGKKILFCAQKMAAIEVVRHRLEK 469 (1775)
Q Consensus 404 ~aDsSQ~~av~----~~~~g~~~vi~GPPGTGKSQTIaNlIa~~la---------~Gk~VLfVaeK~aALdVV~~RL~~ 469 (1775)
T Consensus 8 ~py~~Q~e~m~~v~~~l~~~~~~llEaPTGtGKTl--a-lL~~al~~~~~~~~~~~~~ki~~~t~t~~~~~~~~~elr~ 83 (289)
T smart00488 8 EPYPIQYEFMEELKRVLDRGKIGILESPTGTGKTL--S-LLCLTLTWLRSFPERIQKIKLIYLSRTVSEIEKRLEELRK 83 (289)
T ss_pred CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHH--H-HHHHHHHHHHHCHHCCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 99989999999999999749979998999651899--9-9999999999670102456168761537889999999986