HHsearch alignment for GI: 254780233 and conserved domain: CHL00071
>CHL00071 tufA elongation factor Tu.
Probab=100.00 E-value=0 Score=353.82 Aligned_cols=283 Identities=28% Similarity=0.368 Sum_probs=222.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHH
Q ss_conf 49998546898778899999983961423220000038857798709606467999998997999972898754079999
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVE 100 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVe 100 (624)
T Consensus 14 ni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~iD~PGH~~fv~nmi 93 (409)
T CHL00071 14 NIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHVDCPGHADYVKNMI 93 (409)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEEECCCHHHHHHHHH
T ss_conf 99999545883999999986453004513343155323797687369448802489962875999986796789999987
Q ss_pred HHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEE-EEEECCCCCC-CC-HHHHHHHHHHHHHHCCCCHHHCCHHHH
Q ss_conf 99874217899997687886478999999997299789-9997543667-40-256899999888622673011042668
Q gi|254780233|r 101 RILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPI-VVVNKVDRSD-AR-ADEVINEVFDLFSALDATDAQLDFPIL 177 (624)
Q Consensus 101 r~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~I-vvINKiDr~~-a~-~~~v~~ei~dlf~~l~a~de~ld~Pv~ 177 (624)
T Consensus 94 ~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~~~~~~e~i~~~i~~~l~~~g~~~~--~i~~v 171 (409)
T CHL00071 94 TGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDEELLELVELEVRELLDKYDFPGD--EIPIV 171 (409)
T ss_pred HHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC--CCEEE
T ss_conf 5230158128999868788500499999999739993655555679854899999999999999997399845--56089
Q ss_pred HHHHHCCEECCCC-------CCCCCCCCHHHHHHHHCCCCCCCCC-CCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf 8788659164674-------2233486413555321024542233-2000001111013677734999996078051598
Q gi|254780233|r 178 YGSGRFGWMSDSS-------DGSRDQGMVPLLNLIVDHVPPPVIS-EGEFKMIGTILEKDPFLGRIVTGRIHSGTIKSNQ 249 (624)
Q Consensus 178 ~~Sa~~G~~~~~~-------~~~~~~gl~~Lld~Ii~~iP~P~~~-e~pl~~~V~~i~~d~y~Gria~gRV~sGtlk~Gd 249 (624)
T Consensus 172 p~sa~~~~~~~~~~~~~~~~~~~w~~~~~~Ll~~l~~~~p~~~r~~~~p~r~~Id~vf~v~G~GtVv~G~v~sG~v~~Gd 251 (409)
T CHL00071 172 AGSALLALEALIENPKIKRGENKWVDKIYNLMDAVDSYIPTPERDTDKPFLMAIEDVFSITGRGTVATGRIERGTVKVGD 251 (409)
T ss_pred ECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCEEEEEEEEEECCCCCCC
T ss_conf 65213323431258754556561244799999988723778888767760644221475389788999999145634999
Q ss_pred EEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC--CC--CCCCCCCEECCCCCCCC
Q ss_conf 8999605785012114553011036653444112545543222--23--32101221105565211
Q gi|254780233|r 250 NIKALSPDGALVEVGRVSKILAFRGIDRQPIDEAHAGDIVSIA--GL--VKATVADTFCDPSIDEP 311 (624)
Q Consensus 250 ~V~vl~~~g~~~~~~kV~~L~~~~G~~r~~v~ea~AGDIvaIa--Gl--~~~~iGDTL~~~~~p~~ 311 (624)
T Consensus 252 ~v~i~~~~~--~~~~~VksI~~~----~~~~~~a~aG~~v~l~L~gi~~~~I~rG~VL~~p~~~~~ 311 (409)
T CHL00071 252 TVEIVGLRE--TRTTTVTGLEMF----QKTLDEGLAGDNVGILLRGIQKEDIERGMVLAKPGTITP 311 (409)
T ss_pred EEEEEECCC--CCEEEEEEEEEC----CCCCCEECCCCEEEEEECCCCHHHCCCEEEEECCCCCCC
T ss_conf 899997699--860799999988----959888879988999975998788774689968999987