HHsearch alignment for GI: 254780233 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=97.86 E-value=7.3e-05 Score=51.12 Aligned_cols=154 Identities=21% Similarity=0.299 Sum_probs=85.2
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC-CEECCCCH--HHHHCCCEEEEEEEE-----------------EE
Q ss_conf 31499985468987788999999839614232200-00038857--798709606467999-----------------99
Q gi|254780233|r 19 IRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVS-ERVMDCND--LEKERGITILAKVTS-----------------IV 78 (624)
Q Consensus 19 IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~-~~vmD~~~--~EreRGITI~a~~~~-----------------~~ 78 (624)
T Consensus 13 ~~~i~v~Gp~GSGKTaLie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ai~~l~~ 92 (202)
T COG0378 13 MLRIGVGGPPGSGKTALIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEAIEELVL 92 (202)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH
T ss_conf 48999617998678999999999997527768996404006559999737798068740387658867889999999863
Q ss_pred E-CCEEEEEECCCCC--CCCHHHHHHHHHHHC-EEEEEEECCCCCCHHHHHHHHHHHHCCC-----CEEEEEECCCCC--
Q ss_conf 8-9979999728987--540799999987421-7899997687886478999999997299-----789999754366--
Q gi|254780233|r 79 W-NDVRINIVDTPGH--ADFGGEVERILCMVE-SVVVLVDAAEGPMPQTKFVVGKALKIGL-----RPIVVVNKVDRS-- 147 (624)
Q Consensus 79 ~-~~~~iNiiDTPGH--~DF~gEVer~l~~~D-gaiLvVdA~eGv~~QT~~vl~~A~~~~l-----~~IvvINKiDr~-- 147 (624)
T Consensus 93 ~~~~~Dll~iEs~GNL~~~~------sp~L~d~~~v~VidvteGe~~P-----~K----~gP~i~~aDllVInK~DLa~~ 157 (202)
T COG0378 93 DFPDLDLLFIESVGNLVCPF------SPDLGDHLRVVVIDVTEGEDIP-----RK----GGPGIFKADLLVINKTDLAPY 157 (202)
T ss_pred CCCCCCEEEEECCCCEECCC------CCCHHHCEEEEEEECCCCCCCC-----CC----CCCCEEEEEEEEEEHHHHHHH
T ss_conf 17767789992376432446------8041304699999878888876-----55----799646741899856773877
Q ss_pred -CCCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHC
Q ss_conf -740256899999888622673011042668878865916467422334864135553210
Q gi|254780233|r 148 -DARADEVINEVFDLFSALDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVD 207 (624)
Q Consensus 148 -~a~~~~v~~ei~dlf~~l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~ 207 (624)
T Consensus 158 v~~dlevm~~da~~----~n-----p~~~ii~~n~ktg-----------~G~~~~~~~i~~ 198 (202)
T COG0378 158 VGADLEVMARDAKE----VN-----PEAPIIFTNLKTG-----------EGLDEWLRFIEP 198 (202)
T ss_pred HCCCHHHHHHHHHH----HC-----CCCCEEEEECCCC-----------CCHHHHHHHHHH
T ss_conf 28669999999998----49-----9998899847878-----------689999999876