HHsearch alignment for GI: 254780233 and conserved domain: COG1084
>COG1084 Predicted GTPase [General function prediction only].
Probab=98.77 E-value=3.6e-07 Score=66.27 Aligned_cols=113 Identities=25% Similarity=0.362 Sum_probs=76.6
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCH-
Q ss_conf 4314999854689877889999998396142322000003885779870960646799999899799997289875407-
Q gi|254780233|r 18 QIRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFG- 96 (624)
Q Consensus 18 ~IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~- 96 (624)
T Consensus 167 ~~pTivVaG~PNVGKSSlv~~l---T~AkpEvA~YP--F-------TTK~i~v----Ghfe~~~~R~QvIDTPGlLDRPl 230 (346)
T COG1084 167 DLPTIVVAGYPNVGKSSLVRKL---TTAKPEVAPYP--F-------TTKGIHV----GHFERGYLRIQVIDTPGLLDRPL 230 (346)
T ss_pred CCCEEEEECCCCCCHHHHHHHH---HCCCCCCCCCC--C-------CCCCEEE----EEEECCCCEEEEECCCCCCCCCH
T ss_conf 9973898569987589999887---54897667888--5-------3365467----65504870589842886457885
Q ss_pred ---HHHHH----HHHH-HCEEEEEEECCC----CCCHHHHHHHHHH-HHCCCCEEEEEECCCCC
Q ss_conf ---99999----9874-217899997687----8864789999999-97299789999754366
Q gi|254780233|r 97 ---GEVER----ILCM-VESVVVLVDAAE----GPMPQTKFVVGKA-LKIGLRPIVVVNKVDRS 147 (624)
Q Consensus 97 ---gEVer----~l~~-~DgaiLvVdA~e----Gv~~QT~~vl~~A-~~~~l~~IvvINKiDr~ 147 (624)
T Consensus 231 ~ErN~IE~qAi~AL~hl~~~IlF~~D~Se~cgy~lE~Q~~-L~~eIk~~f~~p~v~V~nK~D~~ 293 (346)
T COG1084 231 EERNEIERQAILALRHLAGVILFLFDPSETCGYSLEEQIS-LLEEIKELFKAPIVVVINKIDIA 293 (346)
T ss_pred HHHCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHH-HHHHHHHHCCCCEEEEEECCCCC
T ss_conf 7736899999999997428589997685002899999999-99999985388769997410124