HHsearch alignment for GI: 254780233 and conserved domain: COG1163
>COG1163 DRG Predicted GTPase [General function prediction only].
Probab=98.32 E-value=2.6e-06 Score=60.69 Aligned_cols=111 Identities=18% Similarity=0.338 Sum_probs=71.6
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCC-C--
Q ss_conf 3149998546898778899999983961423220000038857798709606467999998997999972898754-0--
Q gi|254780233|r 19 IRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHAD-F-- 95 (624)
Q Consensus 19 IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~D-F-- 95 (624)
T Consensus 63 da~v~lVGfPsvGKStLL~~L---Tnt~seva~y~FT-------------Tl~~vPG~l~Y~ga~IQild~Pgii~gas~ 126 (365)
T COG1163 63 DATVALVGFPSVGKSTLLNKL---TNTKSEVADYPFT-------------TLEPVPGMLEYKGAQIQLLDLPGIIEGASS 126 (365)
T ss_pred CEEEEEECCCCCCHHHHHHHH---HCCCCCCCCCCCE-------------ECCCCCCEEEECCCEEEEECCCCCCCCCCC
T ss_conf 738999768874589999887---6887643456741-------------024457447547816999727631257656
Q ss_pred ----HHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCC-----CEEEEEECCCC
Q ss_conf ----7999999874217899997687886478999999997299-----78999975436
Q gi|254780233|r 96 ----GGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGL-----RPIVVVNKVDR 146 (624)
Q Consensus 96 ----~gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l-----~~IvvINKiDr 146 (624)
T Consensus 127 g~grG~~vls~~R~ADlIiiVld~~~~~~-~~~~i~~ELe~~GIrlnk~~p~V~I~kk~~ 185 (365)
T COG1163 127 GRGRGRQVLSVARNADLIIIVLDVFEDPH-HRDIIERELEDVGIRLNKRPPDVTIKKKES 185 (365)
T ss_pred CCCCCCEEEEEECCCCEEEEEEECCCCHH-HHHHHHHHHHHCCEEECCCCCCEEEEEECC
T ss_conf 88876465465215888999971688824-889999999856768217999659999525