HHsearch alignment for GI: 254780233 and conserved domain: COG2262
>COG2262 HflX GTPases [General function prediction only].
Probab=98.43 E-value=5.2e-06 Score=58.67 Aligned_cols=154 Identities=21% Similarity=0.319 Sum_probs=93.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEC-CEEEEEECCCCCCC-
Q ss_conf 2431499985468987788999999839614232200000388577987096064679999989-97999972898754-
Q gi|254780233|r 17 MQIRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWN-DVRINIVDTPGHAD- 94 (624)
Q Consensus 17 ~~IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~-~~~iNiiDTPGH~D- 94 (624)
T Consensus 190 ~~~p~vaLvGYTNAGKSTL~N~L---T~~~---~~~~d~LF----------ATLdpttR~~~l~~g~~vlLtDTVGFI~~ 253 (411)
T COG2262 190 SGIPLVALVGYTNAGKSTLFNAL---TGAD---VYVADQLF----------ATLDPTTRRIELGDGRKVLLTDTVGFIRD 253 (411)
T ss_pred CCCCEEEEEEECCCCHHHHHHHH---HCCC---EECCCCCC----------CCCCCCEEEEEECCCCEEEEECCCCCCCC
T ss_conf 69975898732344499999887---2457---13046664----------21057404898079964998657567155
Q ss_pred --------CHHHHHHHHHHHCEEEEEEECCCC-CCHHHHHHHHHHHHC---CCCEEEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf --------079999998742178999976878-864789999999972---99789999754366740256899999888
Q gi|254780233|r 95 --------FGGEVERILCMVESVVVLVDAAEG-PMPQTKFVVGKALKI---GLRPIVVVNKVDRSDARADEVINEVFDLF 162 (624)
Q Consensus 95 --------F~gEVer~l~~~DgaiLvVdA~eG-v~~QT~~vl~~A~~~---~l~~IvvINKiDr~~a~~~~v~~ei~dlf 162 (624)
T Consensus 254 LP~~LV~AFksTLEE-~~~aDlllhVVDaSdp~~~~~~~~v~~vL~el~~~~~p~i~v~NKiD~~~~~--~~~~~~~~-- 328 (411)
T COG2262 254 LPHPLVEAFKSTLEE-VKEADLLLHVVDASDPEILEKLEAVEDVLAEIGADEIPIILVLNKIDLLEDE--EILAELER-- 328 (411)
T ss_pred CCHHHHHHHHHHHHH-HHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH--HHHHHHHH--
T ss_conf 986799999998987-6227779997406885189999999999997488999789997641015732--22345663--
Q ss_pred HHCCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 6226730110426688788659164674223348641355532102454
Q gi|254780233|r 163 SALDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPP 211 (624)
Q Consensus 163 ~~l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~ 211 (624)
T Consensus 329 ---~~-----~-~~v~iSA~~~-----------~gl~~L~~~i~~~l~~ 357 (411)
T COG2262 329 ---GS-----P-NPVFISAKTG-----------EGLDLLRERIIELLSG 357 (411)
T ss_pred ---CC-----C-CEEEEEECCC-----------CCHHHHHHHHHHHHHH
T ss_conf ---48-----9-7489980667-----------5989999999998631