HHsearch alignment for GI: 254780233 and conserved domain: PRK00049

Probab=100.00  E-value=0  Score=353.06  Aligned_cols=282  Identities=28%  Similarity=0.379  Sum_probs=219.7

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC-EECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHH
Q ss_conf             4999854689877889999998396142322000-003885779870960646799999899799997289875407999
Q gi|254780233|r   21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSE-RVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEV   99 (624)
Q Consensus        21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~-~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEV   99 (624)
T Consensus        14 ni~~~GHVD~GKSTL~g~Lt~~l~~~~g~~~~~~~~~~D~~~eEr~rGiTid~~~~~~~t~~~~~~~iD~PGH~~fiknm   93 (397)
T PRK00049         14 NVGTIGHVDHGKTTLTAAITKVLAKKYGGAEAKAYDQIDNAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNM   93 (397)
T ss_pred             EEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCEEEEEEEEEECCCCEEEEECCCCHHHHHHHH
T ss_conf             99999125888999999998666654385310013330257667625816998799997288149995178638889998


Q ss_pred             HHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCE-EEEEECCCCCC--CCHHHHHHHHHHHHHHCCCCHHHCCHHH
Q ss_conf             99987421789999768788647899999999729978-99997543667--4025689999988862267301104266
Q gi|254780233|r  100 ERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRP-IVVVNKVDRSD--ARADEVINEVFDLFSALDATDAQLDFPI  176 (624)
Q Consensus       100 er~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~-IvvINKiDr~~--a~~~~v~~ei~dlf~~l~a~de~ld~Pv  176 (624)
T Consensus        94 I~Ga~~~D~alLVV~A~~G~~~QT~EHl~l~~~LGv~~~iV~vnK~D~v~~~~~~~~v~~~i~~~l~~~~f~~~--~ipi  171 (397)
T PRK00049         94 ITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKCDMVDDEELLELVEMEVRELLSKYDFPGD--DTPI  171 (397)
T ss_pred             HHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCC--CCCE
T ss_conf             73012156799999748886652899999999809982799998668888599999999999999984699844--4768


Q ss_pred             HHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCCCCCC-CCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEC
Q ss_conf             887886591646742233486413555321024542233-2000001111013677734999996078051598899960
Q gi|254780233|r  177 LYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPPPVIS-EGEFKMIGTILEKDPFLGRIVTGRIHSGTIKSNQNIKALS  255 (624)
Q Consensus       177 ~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~P~~~-e~pl~~~V~~i~~d~y~Gria~gRV~sGtlk~Gd~V~vl~  255 (624)
T Consensus       172 v~~S~~~~~~~-~~~~~~~~~i~~Ll~~ld~~~~~p~r~~~~p~r~~Id~vf~i~G~GtVVtGtv~sG~i~~Gd~v~i~~  250 (397)
T PRK00049        172 IRGSALKALEE-IGDPEWEAKILELMEAVDSYIPEPERAIDKPFLMPIEDVFSISGRGTVVTGRVERGIIKVGEEVEIVG  250 (397)
T ss_pred             EEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEECCCCEEEEEEEEEEEECCCCEEEEEE
T ss_conf             98550031147-78653178999999999864778888888860777233887679727999898000560799899960


Q ss_pred             CCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCC--CC--CCCCCCCEECCCCCCCC
Q ss_conf             5785012114553011036653444112545543222--23--32101221105565211
Q gi|254780233|r  256 PDGALVEVGRVSKILAFRGIDRQPIDEAHAGDIVSIA--GL--VKATVADTFCDPSIDEP  311 (624)
Q Consensus       256 ~~g~~~~~~kV~~L~~~~G~~r~~v~ea~AGDIvaIa--Gl--~~~~iGDTL~~~~~p~~  311 (624)
T Consensus       251 ~~~~--~~~~VksIq~~----~~~v~~a~aG~~v~i~L~gi~~~~I~rG~vL~~p~~~~p  304 (397)
T PRK00049        251 IRDT--QKTTVTGVEMF----RKLLDEGQAGDNVGLLLRGIKREDVERGQVLAKPGSITP  304 (397)
T ss_pred             CCCC--CEEEEEEEEEC----CEEEEEECCCCEEEEEECCCCHHHCCCCCEEECCCCCCC
T ss_conf             6988--47999999962----707026358877999977998898576019956998887