HHsearch alignment for GI: 254780233 and conserved domain: PRK10463
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional.
Probab=97.56 E-value=0.00032 Score=46.89 Aligned_cols=160 Identities=21% Similarity=0.271 Sum_probs=85.6
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCC-CEECCCCHHHHHC--CCEEEEEEEE-------------
Q ss_conf 46802431499985468987788999999839614232200-0003885779870--9606467999-------------
Q gi|254780233|r 13 RLGYMQIRNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVS-ERVMDCNDLEKER--GITILAKVTS------------- 76 (624)
Q Consensus 13 ~~~~~~IRNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~-~~vmD~~~~EreR--GITI~a~~~~------------- 76 (624)
T Consensus 98 ~f~~~gv~~lNl~sSPGSGKTtLLe~ti~~L~~~~~~aVIeGD~~-T~~DA~RI~~~Gv~avQInTG~~CHLDA~MV~~a 176 (290)
T PRK10463 98 RFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQ-TVNDAARIRATGTPAIQVNTGKGCHLDAQMIADA 176 (290)
T ss_pred HHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCC-CHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHH
T ss_conf 999879189993069987889999999998733675799960423-5667999997699589954799767599999999
Q ss_pred ---EEECCEEEEEEC------CCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf ---998997999972------89875407999999874217899997687886478999999997299789999754366
Q gi|254780233|r 77 ---IVWNDVRINIVD------TPGHADFGGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRS 147 (624)
Q Consensus 77 ---~~~~~~~iNiiD------TPGH~DF~gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~ 147 (624)
T Consensus 177 l~~l~l~~~dllfIENVGNLVCPA~FDLG---------E~~kVvvlSVtEGeDKPl----KYP~mF~~ad~vlinKiDLl 243 (290)
T PRK10463 177 APRLPLDDNGILFIENVGNLVCPASFDLG---------EKHKVAVLSVTEGEDKPL----KYPHMFAAASLMLLNKVDLL 243 (290)
T ss_pred HHHCCCCCCCEEEEECCCCCCCCCCCCCC---------CCEEEEEEEECCCCCCCC----CCHHHHHHCCEEEEEHHHHH
T ss_conf 98489877989998127884355120367---------761799997068888644----47667642578998656512
Q ss_pred C---CCHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHH
Q ss_conf 7---4025689999988862267301104266887886591646742233486413555321
Q gi|254780233|r 148 D---ARADEVINEVFDLFSALDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIV 206 (624)
Q Consensus 148 ~---a~~~~v~~ei~dlf~~l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii 206 (624)
T Consensus 244 p~~dFD~~~~~~~~~~----vNp-----~~~v~~vSa~tG-----------eGld~W~~WL~ 285 (290)
T PRK10463 244 PYLNFDVEKCIACARE----VNP-----EIEIILISATSG-----------EGMDQWLNWLE 285 (290)
T ss_pred HHCCCCHHHHHHHHHH----HCC-----CCCEEEEECCCC-----------CCHHHHHHHHH
T ss_conf 2028899999999998----698-----985899756888-----------78999999999