HHsearch alignment for GI: 254780233 and conserved domain: PRK10867
>PRK10867 signal recognition particle protein; Provisional.
Probab=96.21 E-value=0.04 Score=33.14 Aligned_cols=132 Identities=24% Similarity=0.272 Sum_probs=70.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCC-CCCEECCCC---HHHHHC------CCEEEEEEEE-------------E
Q ss_conf 4999854689877889999998396142322-000003885---779870------9606467999-------------9
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQR-VSERVMDCN---DLEKER------GITILAKVTS-------------I 77 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~-v~~~vmD~~---~~EreR------GITI~a~~~~-------------~ 77 (624)
T Consensus 102 VIm~vGLqGsGKTTT~aKLA~~lk~--k~~k~vllvaaDt~RpaA~eQL~~la~~~~v~~~~~~~~~dp~~ia~~a~~~a 179 (453)
T PRK10867 102 VVLMAGLQGAGKTTSVGKLGKFLRE--KHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEA 179 (453)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH--CCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHH
T ss_conf 9999746888518589999999997--38983798558877058999999999851980436788998899999999999
Q ss_pred EECCEEEEEECCCCC--CC--CHHHHHHHHHHH--CEEEEEEECCCCCCHHHHHHHHHHHHCCCCE-EEEEECCCCCCCC
Q ss_conf 989979999728987--54--079999998742--1789999768788647899999999729978-9999754366740
Q gi|254780233|r 78 VWNDVRINIVDTPGH--AD--FGGEVERILCMV--ESVVVLVDAAEGPMPQTKFVVGKALKIGLRP-IVVVNKVDRSDAR 150 (624)
Q Consensus 78 ~~~~~~iNiiDTPGH--~D--F~gEVer~l~~~--DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~-IvvINKiDr~~a~ 150 (624)
T Consensus 180 k~~~~DvvivDTAGRl~~d~~Lm~El~~i~~~~~P~e~llV~Da~~G---Q~a~~~a~~F~~~~~~~gvIlTKlDg-dar 255 (453)
T PRK10867 180 KLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTG---QDAANTAKAFNEALPLTGVVLTKVDG-DAR 255 (453)
T ss_pred HHCCCCEEEEECCCCHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCC---HHHHHHHHHHHHHCCCCEEEEECCCC-CCC
T ss_conf 97799999997876012108889999999876378713797432235---66899999999855987078750467-876
Q ss_pred HHHHHHHH
Q ss_conf 25689999
Q gi|254780233|r 151 ADEVINEV 158 (624)
Q Consensus 151 ~~~v~~ei 158 (624)
T Consensus 256 GG~alS~~ 263 (453)
T PRK10867 256 GGAALSIR 263 (453)
T ss_pred CHHHHHHH
T ss_conf 13898999