HHsearch alignment for GI: 254780233 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=95.39  E-value=0.051  Score=32.47  Aligned_cols=133  Identities=13%  Similarity=0.139  Sum_probs=68.2

Q ss_pred             EEEEC-CCCCCHHHHHHHHHHHCCCCCCCCC-CCCEECCCCHH-------H--HHCCC-----EEEEEEE-E--------
Q ss_conf             99985-4689877889999998396142322-00000388577-------9--87096-----0646799-9--------
Q gi|254780233|r   22 IAIIA-HVDHGKTTLVDELLKQSGVFRDNQR-VSERVMDCNDL-------E--KERGI-----TILAKVT-S--------   76 (624)
Q Consensus        22 iaIia-HvDhGKTTL~d~LL~~sG~~~~~~~-v~~~vmD~~~~-------E--reRGI-----TI~a~~~-~--------   76 (624)
T Consensus         4 i~~~~~KGG~GKtT~a~~l---a~~~~~~g~~v--~~iD~Dpq~s~~~W~e~a~~~~~~~~~~~v~~~~~~~~l~~~~e~   78 (231)
T PRK13849          4 LTFCSFKGGAGKTTALMGL---CAALASDGKRV--ALFEADENRPLTRWKENALRSNTWDPACEVYAADELPLLEAAYED   78 (231)
T ss_pred             EEEEECCCCCCHHHHHHHH---HHHHHHCCCEE--EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH
T ss_conf             9996189987699999999---99999789959--999689986889999876525898877523405652578999988


Q ss_pred             EEECCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCC---HHHHHHHH---HHHHCCCCEEEEEECCCCCCCC
Q ss_conf             99899799997289875407999999874217899997687886---47899999---9997299789999754366740
Q gi|254780233|r   77 IVWNDVRINIVDTPGHADFGGEVERILCMVESVVVLVDAAEGPM---PQTKFVVG---KALKIGLRPIVVVNKVDRSDAR  150 (624)
Q Consensus        77 ~~~~~~~iNiiDTPGH~DF~gEVer~l~~~DgaiLvVdA~eGv~---~QT~~vl~---~A~~~~l~~IvvINKiDr~~a~  150 (624)
T Consensus        79 ~~~~~~D~VIIDtpg~~s~--~~~~Ai~~ADLVLIP~qPSp~D~~~a~~tv~~i~~~~~~~~~~ip~~vlltRv~a--~~  154 (231)
T PRK13849         79 AELQGFDYALADTHGGSSE--LNNTIIASSNLLLIPTMLTPLDIDEALSTYRYVIELLLSENLAIPTAILRQRVPV--GR  154 (231)
T ss_pred             HHHCCCCEEEECCCCCCCH--HHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCH--HH
T ss_conf             7536998899818997758--9999999789899779998667999999999999999972878865666540504--54


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             2568999998886
Q gi|254780233|r  151 ADEVINEVFDLFS  163 (624)
Q Consensus       151 ~~~v~~ei~dlf~  163 (624)
T Consensus       155 ~t~~~~~i~~~le  167 (231)
T PRK13849        155 LTTSQRAMSDMLE  167 (231)
T ss_pred             HCHHHHHHHHHHH
T ss_conf             0688999999996