HHsearch alignment for GI: 254780233 and conserved domain: PTZ00336
>PTZ00336 elongation factor 1-alpha; Provisional.
Probab=100.00 E-value=0 Score=350.69 Aligned_cols=276 Identities=23% Similarity=0.329 Sum_probs=223.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCC------CC---------CEECCCCHHHHHCCCEEEEEEEEEEECCEEEE
Q ss_conf 4999854689877889999998396142322------00---------00038857798709606467999998997999
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQR------VS---------ERVMDCNDLEKERGITILAKVTSIVWNDVRIN 85 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~------v~---------~~vmD~~~~EreRGITI~a~~~~~~~~~~~iN 85 (624)
T Consensus 9 ni~~~GhVD~GKSTL~G~Ll~~~~~v~~~~l~~~~~~~~~~g~~s~~~a~~~D~~~~Er~rGiTid~~~~~f~t~~~~~~ 88 (449)
T PTZ00336 9 NLVVVGHVDAGKSTATGHLIYKCGGIDKRTIEKFEKEAAEIGKASFKYAWVLDKLKAERERGITIDIALWKFESPKSVFT 88 (449)
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCEEEEEEEEEEECCCEEEE
T ss_conf 99999277896888899999874884789999999999871875143254512772232287589867999974984899
Q ss_pred EECCCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCH-------HHHHHHHHHHHCCCCEE-EEEECCCC-----CCCCHH
Q ss_conf 972898754079999998742178999976878864-------78999999997299789-99975436-----674025
Q gi|254780233|r 86 IVDTPGHADFGGEVERILCMVESVVVLVDAAEGPMP-------QTKFVVGKALKIGLRPI-VVVNKVDR-----SDARAD 152 (624)
Q Consensus 86 iiDTPGH~DF~gEVer~l~~~DgaiLvVdA~eGv~~-------QT~~vl~~A~~~~l~~I-vvINKiDr-----~~a~~~ 152 (624)
T Consensus 89 iiD~PGH~~fi~nmi~Gas~aD~aiLVVdA~~G~~e~g~~~~gQTreHl~i~~~Lgv~~iiV~vNKmD~~~v~~~~~r~~ 168 (449)
T PTZ00336 89 IIDAPGHRDFIKNMITGTSQADAAILMIDSTHGGFEAGISKDGQTREHALLAFTLGVKQMVVCCNKMDDKTVTYAQSRYD 168 (449)
T ss_pred EEECCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH
T ss_conf 98689468889999976500676799998787741035566775399999998669977999986201566211378999
Q ss_pred HHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCEE--CCCCCCCCCCCCHHHHHHHHCCCCCCC-CCCCHHHCCCCCCCCC
Q ss_conf 6899999888622673011042668878865916--467422334864135553210245422-3320000011110136
Q gi|254780233|r 153 EVINEVFDLFSALDATDAQLDFPILYGSGRFGWM--SDSSDGSRDQGMVPLLNLIVDHVPPPV-ISEGEFKMIGTILEKD 229 (624)
Q Consensus 153 ~v~~ei~dlf~~l~a~de~ld~Pv~~~Sa~~G~~--~~~~~~~~~~gl~~Lld~Ii~~iP~P~-~~e~pl~~~V~~i~~d 229 (624)
T Consensus 169 ~i~~e~~~~l~~~g~~~~~v--~~IPiSa~~Gdni~~~s~~~~Wy~-GptLl~~L-d~~~~~~r~~~~p~r~pV~~vf~~ 244 (449)
T PTZ00336 169 EISKEVGAYLKRVGYNPEKV--RFIPISGWQGDNMIEKSDNMPWYK-GPTLLDAL-DMLEPPVRPVDKPLRLPLQDVYKI 244 (449)
T ss_pred HHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCEEC-CCHHHHHH-HCCCCCCCCCCCCCCCCCCEEEEC
T ss_conf 99999999998749990005--435420104777532655575410-52489997-544898775667642340107732
Q ss_pred CCCCEEEEEEECCCCCCCCCEEEEECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCC--CCCC--CCCCCCEECC
Q ss_conf 77734999996078051598899960578501211455301103665344411254554322--2233--2101221105
Q gi|254780233|r 230 PFLGRIVTGRIHSGTIKSNQNIKALSPDGALVEVGRVSKILAFRGIDRQPIDEAHAGDIVSI--AGLV--KATVADTFCD 305 (624)
Q Consensus 230 ~y~Gria~gRV~sGtlk~Gd~V~vl~~~g~~~~~~kV~~L~~~~G~~r~~v~ea~AGDIvaI--aGl~--~~~iGDTL~~ 305 (624)
T Consensus 245 ~g~gtvv~G~V~sG~v~~Gd~V~i~-Ps~~---~~~VksI~~~~----~~v~~A~aG~~V~i~L~~i~~~dI~rGdVl~~ 316 (449)
T PTZ00336 245 GGIGTVPVGRVETGIMKPGDVVTFA-PANV---TTEVKSIEMHH----EQLAEAQPGDNVGFNVKNVSVKDIRRGNVCGN 316 (449)
T ss_pred CCCCEEEEEEEECCCCCCCCEEEEC-CCCC---EEEEEEEEECC----CEECEECCCCEEEEECCCCCHHCCCCCCEEEC
T ss_conf 7883188899943630589999991-7998---79998999899----38596779984789248873530788639962
Q ss_pred CCC
Q ss_conf 565
Q gi|254780233|r 306 PSI 308 (624)
Q Consensus 306 ~~~ 308 (624)
T Consensus 317 ~~~ 319 (449)
T PTZ00336 317 SKN 319 (449)
T ss_pred CCC
T ss_conf 899