HHsearch alignment for GI: 254780233 and conserved domain: TIGR00101
>TIGR00101 ureG urease accessory protein UreG; InterPro: IPR004400 This is a GTP hydrolase for assembly of the nickel metallocentre of urease. A similar protein, hypB, is an accessory protein for expression of hydrogenase, which also uses nickel. They play a central role in nitrogen metabolism.; GO: 0005524 ATP binding, 0016151 nickel ion binding.
Probab=95.42 E-value=0.03 Score=33.96 Aligned_cols=112 Identities=21% Similarity=0.346 Sum_probs=65.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC--------E-ECCCCHHHHHCCCEEEEEEE---E------------
Q ss_conf 4999854689877889999998396142322000--------0-03885779870960646799---9------------
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSE--------R-VMDCNDLEKERGITILAKVT---S------------ 76 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~--------~-vmD~~~~EreRGITI~a~~~---~------------ 76 (624)
T Consensus 3 ~iG~~GPvG~Gktal~e~l~~~~~~~y~~av~tndiyt~eda~fl~~~~~l~~~ri~GvetGGCPhtairedas~nl~a~ 82 (199)
T TIGR00101 3 KIGVAGPVGSGKTALIEALTRELAKKYDLAVITNDIYTQEDAEFLVKNSVLPPERILGVETGGCPHTAIREDASLNLEAV 82 (199)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 66650477764689999999988740667787311001246888876412662226774158987300100021218899
Q ss_pred ----EEECCEEEEEECCCCC---CCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCC-----EEEEEECC
Q ss_conf ----9989979999728987---54079999998742178999976878864789999999972997-----89999754
Q gi|254780233|r 77 ----IVWNDVRINIVDTPGH---ADFGGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLR-----PIVVVNKV 144 (624)
Q Consensus 77 ----~~~~~~~iNiiDTPGH---~DF~gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~-----~IvvINKi 144 (624)
T Consensus 83 ~~~~~rf~~~~~~~~esGGdnl~atf------~P~l~d~t~~vidva~G~k---------iPrkGGPGit~sdllvink~ 147 (199)
T TIGR00101 83 EELEARFPDLELVFIESGGDNLSATF------SPELADLTIFVIDVAEGDK---------IPRKGGPGITRSDLLVINKI 147 (199)
T ss_pred HHHHHCCCCEEEEEEECCCCCCEEEC------CCCEEEEEEEEEEECCCCC---------CCCCCCCCCCCHHEEEEECC
T ss_conf 98862156404899832886200002------7640236788997205874---------56778898530012243200
Q ss_pred CCC
Q ss_conf 366
Q gi|254780233|r 145 DRS 147 (624)
Q Consensus 145 Dr~ 147 (624)
T Consensus 148 dla 150 (199)
T TIGR00101 148 DLA 150 (199)
T ss_pred CCC
T ss_conf 125