HHsearch alignment for GI: 254780233 and conserved domain: cd00882
>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.38 E-value=4.9e-12 Score=98.20 Aligned_cols=149 Identities=19% Similarity=0.213 Sum_probs=96.4
Q ss_pred EECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCC-EEEEEEEEEEE--CCEEEEEECCCCCCCCHHHHH
Q ss_conf 985468987788999999839614232200000388577987096-06467999998--997999972898754079999
Q gi|254780233|r 24 IIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGI-TILAKVTSIVW--NDVRINIVDTPGHADFGGEVE 100 (624)
Q Consensus 24 IiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGI-TI~a~~~~~~~--~~~~iNiiDTPGH~DF~gEVe 100 (624)
T Consensus 1 vvG~~~~GKSsl~~~~~~~~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~i~D~~g~~~~~~~~~ 63 (157)
T cd00882 1 VVGDSGVGKTSLLNRLLGGEFV--P---------------EEYETTIIDFYSKTIEVDGKKVKLQIWDTAGQERFRSLRR 63 (157)
T ss_pred CCCCCCCCHHHHHHHHHCCCCC--C---------------CCCCCCEEEEEEEEEEECCEEEEEEEEECCCCHHHHHHHH
T ss_conf 9294996889999999719888--7---------------6468715789999999999999999998589511567899
Q ss_pred HHHHHHCEEEEEEECCCCCCHHHHHH-----HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCHH
Q ss_conf 99874217899997687886478999-----9999972997899997543667402568999998886226730110426
Q gi|254780233|r 101 RILCMVESVVVLVDAAEGPMPQTKFV-----VGKALKIGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDFP 175 (624)
Q Consensus 101 r~l~~~DgaiLvVdA~eGv~~QT~~v-----l~~A~~~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld~P 175 (624)
T Consensus 64 ~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~iiiv~nK~Dl~~~~~~~~~~~~~~~~-------~~~~~~ 136 (157)
T cd00882 64 LYYRGADGIILVYDVTDRESFENVKEWLLLILINKEGENIPIILVGNKIDLPEERVVSEEELAEQLA-------KELGVP 136 (157)
T ss_pred HHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHCCCCCHHHHHHHHH-------HHCCCE
T ss_conf 9975357999998658888899999999999997525898499998535615406688999999999-------878986
Q ss_pred HHHHHHHCCEECCCCCCCCCCCCHHHHHHHHC
Q ss_conf 68878865916467422334864135553210
Q gi|254780233|r 176 ILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVD 207 (624)
Q Consensus 176 v~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~ 207 (624)
T Consensus 137 ~~~~Sa~~~-----------~~i~~l~~~i~~ 157 (157)
T cd00882 137 YFETSAKTG-----------ENVEELFEELAE 157 (157)
T ss_pred EEEECCCCC-----------CCHHHHHHHHHC
T ss_conf 999847888-----------399999999859