HHsearch alignment for GI: 254780233 and conserved domain: cd01876
>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=99.69 E-value=4.1e-16 Score=125.03 Aligned_cols=155 Identities=26% Similarity=0.383 Sum_probs=101.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCC---CC----
Q ss_conf 99985468987788999999839614232200000388577987096064679999989979999728987---54----
Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGH---AD---- 94 (624)
Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH---~D---- 94 (624)
T Consensus 2 IaivG~pN~GKSTL~N~L~~~~~~----~~vs----~------~~gtTr~i--~~~~~-~~~~~~vDtPG~g~~~~~~~~ 64 (170)
T cd01876 2 IAFAGRSNVGKSSLINALTNRKKL----ARTS----K------TPGKTQLI--NFFNV-NDKFRLVDLPGYGYAKVSKEV 64 (170)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCE----EEEE----C------CCCEEEEE--EEEEE-CCEEEEEECCCCHHCCCCHHH
T ss_conf 899989999999999999689962----7860----7------89778520--58853-877999965784010168779
Q ss_pred ---CHHHHHHHHH---HHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCC
Q ss_conf ---0799999987---42178999976878864789999999972997899997543667-4025689999988862267
Q gi|254780233|r 95 ---FGGEVERILC---MVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSD-ARADEVINEVFDLFSALDA 167 (624)
Q Consensus 95 ---F~gEVer~l~---~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~-a~~~~v~~ei~dlf~~l~a 167 (624)
T Consensus 65 ~~~~~~~~~~~l~~~~~~~~vi~viD~~~~~~~~d~~i~~~l~~~~kp~iiVlNKiDlv~~~~~~~~~~~~~~---~l~~ 141 (170)
T cd01876 65 KEKWGKLIEEYLENRENLKGVVLLIDSRHGPTEIDLEMLDWLEELGIPFLVVLTKADKLKKSELAKALKEIKK---ELKL 141 (170)
T ss_pred HHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHH---HHHC
T ss_conf 9999999999998406334999999632237486899999998769987999986753787789999999999---8742
Q ss_pred CHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 301104266887886591646742233486413555321024
Q gi|254780233|r 168 TDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 168 ~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 142 ~--~~~~~ii~iSA~~g-----------~gi~~L~~~I~~~L 170 (170)
T cd01876 142 F--EIDPPIILFSSLKG-----------QGIDELRALIEKWL 170 (170)
T ss_pred C--CCCCEEEEEECCCC-----------CCHHHHHHHHHHHC
T ss_conf 1--79983999988999-----------77999999999859