HHsearch alignment for GI: 254780233 and conserved domain: cd01876

>cd01876 YihA_EngB The YihA (EngB) subfamily. This subfamily of GTPases is typified by the E. coli YihA, an essential protein involved in cell division control. YihA and its orthologs are small proteins that typically contain less than 200 amino acid residues and consists of the GTPase domain only (some of the eukaryotic homologs contain an N-terminal extension of about 120 residues that might be involved in organellar targeting). Homologs of yihA are found in most Gram-positive and Gram-negative pathogenic bacteria, with the exception of Mycobacterium tuberculosis. The broad-spectrum nature of YihA and its essentiality for cell viability in bacteria make it an attractive antibacterial target.
Probab=99.69  E-value=4.1e-16  Score=125.03  Aligned_cols=155  Identities=26%  Similarity=0.383  Sum_probs=101.7

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCC---CC----
Q ss_conf             99985468987788999999839614232200000388577987096064679999989979999728987---54----
Q gi|254780233|r   22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGH---AD----   94 (624)
Q Consensus        22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH---~D----   94 (624)
T Consensus         2 IaivG~pN~GKSTL~N~L~~~~~~----~~vs----~------~~gtTr~i--~~~~~-~~~~~~vDtPG~g~~~~~~~~   64 (170)
T cd01876           2 IAFAGRSNVGKSSLINALTNRKKL----ARTS----K------TPGKTQLI--NFFNV-NDKFRLVDLPGYGYAKVSKEV   64 (170)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCE----EEEE----C------CCCEEEEE--EEEEE-CCEEEEEECCCCHHCCCCHHH
T ss_conf             899989999999999999689962----7860----7------89778520--58853-877999965784010168779


Q ss_pred             ---CHHHHHHHHH---HHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC-CCHHHHHHHHHHHHHHCCC
Q ss_conf             ---0799999987---42178999976878864789999999972997899997543667-4025689999988862267
Q gi|254780233|r   95 ---FGGEVERILC---MVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSD-ARADEVINEVFDLFSALDA  167 (624)
Q Consensus        95 ---F~gEVer~l~---~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~-a~~~~v~~ei~dlf~~l~a  167 (624)
T Consensus        65 ~~~~~~~~~~~l~~~~~~~~vi~viD~~~~~~~~d~~i~~~l~~~~kp~iiVlNKiDlv~~~~~~~~~~~~~~---~l~~  141 (170)
T cd01876          65 KEKWGKLIEEYLENRENLKGVVLLIDSRHGPTEIDLEMLDWLEELGIPFLVVLTKADKLKKSELAKALKEIKK---ELKL  141 (170)
T ss_pred             HHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHH---HHHC
T ss_conf             9999999999998406334999999632237486899999998769987999986753787789999999999---8742


Q ss_pred             CHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             301104266887886591646742233486413555321024
Q gi|254780233|r  168 TDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV  209 (624)
Q Consensus       168 ~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i  209 (624)
T Consensus       142 ~--~~~~~ii~iSA~~g-----------~gi~~L~~~I~~~L  170 (170)
T cd01876         142 F--EIDPPIILFSSLKG-----------QGIDELRALIEKWL  170 (170)
T ss_pred             C--CCCCEEEEEECCCC-----------CCHHHHHHHHHHHC
T ss_conf             1--79983999988999-----------77999999999859