HHsearch alignment for GI: 254780233 and conserved domain: cd01894
>cd01894 EngA1 EngA1 subfamily. This CD represents the first GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.72 E-value=1.7e-16 Score=127.45 Aligned_cols=149 Identities=25% Similarity=0.310 Sum_probs=108.6
Q ss_pred EEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHH---
Q ss_conf 99854689877889999998396142322000003885779870960646799999899799997289875407999---
Q gi|254780233|r 23 AIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEV--- 99 (624)
Q Consensus 23 aIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEV--- 99 (624)
T Consensus 1 aivG~pN~GKSsL~N~l~---~~~--~~ivs~----------~~gtTr~~~~~~~~~~~~~~~lvDTpG~~~~~~~~~~~ 65 (157)
T cd01894 1 AIVGRPNVGKSTLFNRLT---GRR--DAIVED----------TPGVTRDRIYGEAEWGGREFILIDTGGIEPDDEGISKE 65 (157)
T ss_pred CCCCCCCCCHHHHHHHHH---CCC--CEEEEC----------CCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHH
T ss_conf 904899988999999995---887--535407----------99935667899999999889998578755566067899
Q ss_pred -----HHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCH
Q ss_conf -----999874217899997687886478999999997299789999754366740256899999888622673011042
Q gi|254780233|r 100 -----ERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDF 174 (624)
Q Consensus 100 -----er~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld~ 174 (624)
T Consensus 66 ~~~~~~~~i~~ad~il~viDa~~~~~~~d~~i~~~l~~~~kp~i~v~NK~D~~~~--~~~~~~~----~~l~~~------ 133 (157)
T cd01894 66 IREQAELAIEEADVILFVVDGREGLTPADEEIAKYLRKSKKPVILVVNKVDNIKE--EDEAAEF----YSLGFG------ 133 (157)
T ss_pred HHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC--HHHHHHH----HHCCCC------
T ss_conf 9999999998659079999899999989999999999847980999978716586--4569999----965999------
Q ss_pred HHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 66887886591646742233486413555321024
Q gi|254780233|r 175 PILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 175 Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 134 ~~i~iSA~~g-----------~Gid~L~~~I~~~L 157 (157)
T cd01894 134 EPIPISAEHG-----------RGIGDLLDAILELL 157 (157)
T ss_pred CEEEEEEECC-----------CCHHHHHHHHHHHC
T ss_conf 7599996589-----------49999999999659