HHsearch alignment for GI: 254780233 and conserved domain: cd01895
>cd01895 EngA2 EngA2 subfamily. This CD represents the second GTPase domain of EngA and its orthologs, which are composed of two adjacent GTPase domains. Since the sequences of the two domains are more similar to each other than to other GTPases, it is likely that an ancient gene duplication, rather than a fusion of evolutionarily distinct GTPases, gave rise to this family. Although the exact function of these proteins has not been elucidated, studies have revealed that the E. coli EngA homolog, Der, and Neisseria gonorrhoeae EngA are essential for cell viability. A recent report suggests that E. coli Der functions in ribosome assembly and stability.
Probab=99.80 E-value=1.8e-18 Score=140.40 Aligned_cols=156 Identities=28% Similarity=0.313 Sum_probs=112.5
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCC--------
Q ss_conf 499985468987788999999839614232200000388577987096064679999989979999728987--------
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGH-------- 92 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH-------- 92 (624)
T Consensus 4 ~V~ivG~pN~GKSTL~N~l~---g~~--~~~vs----------~~pgtTr~~~~~~~~~~~~~~~~vDtpGi~~~~~~~~ 68 (174)
T cd01895 4 RIAIIGRPNVGKSSLVNALL---GEE--RVIVS----------DIAGTTRDSIDVPFEYDGKKYTLIDTAGIRRKGKVEE 68 (174)
T ss_pred EEEEECCCCCCHHHHHHHHH---CCC--CEEEC----------CCCCCEEECCEEEEEECCEEEEEEECCCCCCCCCCCC
T ss_conf 99999899998999999983---898--44434----------9999157332899999998899985788421344210
Q ss_pred -CCCH--HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCC---HHHHHHHHHHHHHHCC
Q ss_conf -5407--999999874217899997687886478999999997299789999754366740---2568999998886226
Q gi|254780233|r 93 -ADFG--GEVERILCMVESVVVLVDAAEGPMPQTKFVVGKALKIGLRPIVVVNKVDRSDAR---ADEVINEVFDLFSALD 166 (624)
Q Consensus 93 -~DF~--gEVer~l~~~DgaiLvVdA~eGv~~QT~~vl~~A~~~~l~~IvvINKiDr~~a~---~~~v~~ei~dlf~~l~ 166 (624)
T Consensus 69 ~~e~~~~~~~~~~i~~~dvil~viDa~~~~~~~d~~i~~~l~~~~~p~iiv~NK~Dli~~~~~~~~~~~~~~~~~~~~~- 147 (174)
T cd01895 69 GIEKYSVLRTLKAIERADVVLLVIDATEGITEQDLRIAGLILEEGKALVIVVNKWDLVEKDSKTMKEFKKEIRRKLPFL- 147 (174)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECEECCCCCHHHHHHHHHHHHHHHCCC-
T ss_conf 6889999999999984286589975898998899999999998599869998567526764778999999999873416-
Q ss_pred CCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 730110426688788659164674223348641355532102
Q gi|254780233|r 167 ATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDH 208 (624)
Q Consensus 167 a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~ 208 (624)
T Consensus 148 -----~~~~ii~iSA~~g-----------~Gi~~L~~~I~ei 173 (174)
T cd01895 148 -----DYAPIVFISALTG-----------QGVDKLFDAIDEV 173 (174)
T ss_pred -----CCCCEEEEECCCC-----------CCHHHHHHHHHHH
T ss_conf -----8992899974479-----------8999999999986