HHsearch alignment for GI: 254780233 and conserved domain: cd01898
>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.
Probab=99.50 E-value=7.4e-13 Score=103.60 Aligned_cols=153 Identities=20% Similarity=0.316 Sum_probs=95.3
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEC-CEEEEEECCCCC-----CC
Q ss_conf 499985468987788999999839614232200000388577987096064679999989-979999728987-----54
Q gi|254780233|r 21 NIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWN-DVRINIVDTPGH-----AD 94 (624)
Q Consensus 21 NiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~-~~~iNiiDTPGH-----~D 94 (624)
T Consensus 2 ~VAiiG~pNvGKSTLlN~l---~~~~~---~V~----~~------pgTT~~~~~g~i~~~~~~~i~~~DtpGi~~~~~~~ 65 (170)
T cd01898 2 DVGLVGLPNAGKSTLLSAI---SNAKP---KIA----DY------PFTTLVPNLGVVRVDDGRSFVVADIPGLIEGASEG 65 (170)
T ss_pred CEEEECCCCCCHHHHHHHH---HCCCC---EEE----CC------CCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCC
T ss_conf 5899899999899999999---67876---032----56------66523744779993698569996488644455466
Q ss_pred CH--HHHHHHHHHHCEEEEEEECCCCCCH--HHHHHHHHHHH------CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 07--9999998742178999976878864--78999999997------29978999975436674025689999988862
Q gi|254780233|r 95 FG--GEVERILCMVESVVVLVDAAEGPMP--QTKFVVGKALK------IGLRPIVVVNKVDRSDARADEVINEVFDLFSA 164 (624)
Q Consensus 95 F~--gEVer~l~~~DgaiLvVdA~eGv~~--QT~~vl~~A~~------~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~ 164 (624)
T Consensus 66 ~~l~~~~l~~i~~advil~vvD~~~~~~~~~~~~~i~~-~l~~~~~~~~~kp~ilv~NK~Dl~~~--~~~~~~~~~~~~~ 142 (170)
T cd01898 66 KGLGHRFLRHIERTRLLLHVIDLSGDDDPVEDYKTIRN-ELELYNPELLEKPRIVVLNKIDLLDE--EELFELLKELLKE 142 (170)
T ss_pred CCHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHH-HHHHHCHHHHCCCCEEEEEHHHCCCH--HHHHHHHHHHHHH
T ss_conf 22489998613345617999989987898999999999-99982744403865067762024283--5638999999985
Q ss_pred CCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 267301104266887886591646742233486413555321024
Q gi|254780233|r 165 LDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 165 l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 143 ------~~~~~vi~iSA~~g-----------~gi~~L~~~I~~~L 170 (170)
T cd01898 143 ------LWGKPVFPISALTG-----------EGLDELLRKLAELL 170 (170)
T ss_pred ------CCCCCEEEEECCCC-----------CCHHHHHHHHHHHC
T ss_conf ------69995899975479-----------79999999999669