HHsearch alignment for GI: 254780233 and conserved domain: cd04140

>cd04140 ARHI_like ARHI subfamily. ARHI (A Ras homolog member I) is a member of the Ras family with several unique structural and functional properties. ARHI is expressed in normal human ovarian and breast tissue, but its expression is decreased or eliminated in breast and ovarian cancer. ARHI contains an N-terminal extension of 34 residues (human) that is required to retain its tumor suppressive activity. Unlike most other Ras family members, ARHI is maintained in the constitutively active (GTP-bound) state in resting cells and has modest GTPase activity. ARHI inhibits STAT3 (signal transducers and activators of transcription 3), a latent transcription factor whose abnormal activation plays a critical role in oncogenesis. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins. Due to
Probab=98.96  E-value=1.1e-08  Score=76.28  Aligned_cols=153  Identities=19%  Similarity=0.216  Sum_probs=93.8

Q ss_pred             EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHHH
Q ss_conf             99985468987788999999839614232200000388577987096064679999989979999728987540799999
Q gi|254780233|r   22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVER  101 (624)
Q Consensus        22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVer  101 (624)
T Consensus         4 ivllGd~~VGKTsli~r~~~--~~F~~~y--~~Ti~~----------~-~~~~i~~~~~~~~l~iwDtaG~e~~~~l~~~   68 (165)
T cd04140           4 VVVFGAGGVGKSSLVLRFVK--GTFRESY--IPTIED----------T-YRQVISCSKNICTLQITDTTGSHQFPAMQRL   68 (165)
T ss_pred             EEEECCCCCCHHHHHHHHHH--CCCCCCC--CCCCCC----------E-EEEEEEECCEEEEEEEEECCCCCCCCCCHHH
T ss_conf             99989999769999999964--9699986--884542----------0-5589999999999999989998465423244


Q ss_pred             HHHHHCEEEEEEECCCCCCHH-HHHHHHHHHH------CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCH
Q ss_conf             987421789999768788647-8999999997------299789999754366740256899999888622673011042
Q gi|254780233|r  102 ILCMVESVVVLVDAAEGPMPQ-TKFVVGKALK------IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLDF  174 (624)
Q Consensus       102 ~l~~~DgaiLvVdA~eGv~~Q-T~~vl~~A~~------~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld~  174 (624)
T Consensus        69 ~~~~a~~~ilvydit~~~Sf~~~~~~~~~i~~~~~~~~~~~piilVgNK~Dl~~~r~V-~~~e~~~~a~~-------~~~  140 (165)
T cd04140          69 SISKGHAFILVYSVTSKQSLEELKPIYELICEIKGNNIEKIPIMLVGNKCDESHKREV-SSNEGAACATE-------WNC  140 (165)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC-CHHHHHHHHHH-------CCC
T ss_conf             5068857999813898789999999999999996158888878998642464002788-99999999998-------698


Q ss_pred             HHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             6688788659164674223348641355532102
Q gi|254780233|r  175 PILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDH  208 (624)
Q Consensus       175 Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~  208 (624)
T Consensus       141 ~~~E~SAk~~-----------~nV~e~F~~l~~l  163 (165)
T cd04140         141 AFMETSAKTN-----------HNVQELFQELLNL  163 (165)
T ss_pred             EEEEECCCCC-----------CCHHHHHHHHHHC
T ss_conf             8999744779-----------4879999999814