HHsearch alignment for GI: 254780233 and conserved domain: cd04159
>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.
Probab=99.40 E-value=4.8e-12 Score=98.30 Aligned_cols=152 Identities=26% Similarity=0.311 Sum_probs=101.4
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHHH
Q ss_conf 99985468987788999999839614232200000388577987096064679999989979999728987540799999
Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVER 101 (624)
Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVer 101 (624)
T Consensus 2 I~llG~~~~GKTsll~~~~~--~~f~~~---------~~-------pTig~~~~~i~~~~~~l~iwDt~G~e~~~~l~~~ 63 (159)
T cd04159 2 ITLVGLQNSGKTTLVNVIAG--GQFSED---------TI-------PTVGFNMRKVTKGNVTLKVWDLGGQPRFRSMWER 63 (159)
T ss_pred EEEECCCCCCHHHHHHHHHC--CCCCCC---------CC-------CCCCEEEEEEEECCEEEEEEECCCHHHHHHHHHH
T ss_conf 89999999869999999975--999886---------16-------7325058999989999999979835877999998
Q ss_pred HHHHHCEEEEEEECCCCCCHH-HHHHHHHH----HHCCCCEEEEEECCCCCCCC-HHHHHHHHHHHHHHCCCCHHHCCHH
Q ss_conf 987421789999768788647-89999999----97299789999754366740-2568999998886226730110426
Q gi|254780233|r 102 ILCMVESVVVLVDAAEGPMPQ-TKFVVGKA----LKIGLRPIVVVNKVDRSDAR-ADEVINEVFDLFSALDATDAQLDFP 175 (624)
Q Consensus 102 ~l~~~DgaiLvVdA~eGv~~Q-T~~vl~~A----~~~~l~~IvvINKiDr~~a~-~~~v~~ei~dlf~~l~a~de~ld~P 175 (624)
T Consensus 64 y~~~~~~ii~V~D~sd~~s~~~~~~~l~~~~~~~~~~~~piliv~NK~Dl~~~~~~~~i~~~~-~~~~---~~~--~~~~ 137 (159)
T cd04159 64 YCRGVNAIVYVVDAADRTALEAAKNELHDLLEKPSLEGIPLLVLGNKNDLPGALSVDELIEQM-NLKS---ITD--REVS 137 (159)
T ss_pred HHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHH-HHHH---HHC--CCCE
T ss_conf 746863687515778788999999999999854434898289888356764347899999999-9998---734--9987
Q ss_pred HHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 688788659164674223348641355532102
Q gi|254780233|r 176 ILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDH 208 (624)
Q Consensus 176 v~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~ 208 (624)
T Consensus 138 ~~~~SAktg-----------~gI~e~f~wL~~~ 159 (159)
T cd04159 138 CYSISCKEK-----------TNIDIVLDWLIKH 159 (159)
T ss_pred EEEEECCCC-----------CCHHHHHHHHHCC
T ss_conf 999979689-----------6989999999659