>cd04173 Rnd2_Rho7 Rnd2/Rho7 subfamily. Rnd2/Rho7 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd3/RhoE/Rho8. Rnd2/Rho7 is transiently expressed in radially migrating cells in the brain while they are within the subventricular zone of the hippocampus and cerebral cortex. These migrating cells typically develop into pyramidal neurons. Cells that exogenously expressed Rnd2/Rho7 failed to migrate to upper layers of the brain, suggesting that Rnd2/Rho7 plays a role in the radial migration and morphological changes of developing pyramidal neurons, and that Rnd2/Rho7 degradation is necessary for proper cellular migration. The Rnd2/Rho7 GEF Rapostlin is found primarily in the brain and together with Rnd2/Rho7 induces dendrite branching. Unlike Rnd1/Rho6 and Rnd3/RhoE/Rho8, which are RhoA antagonists, Rnd2/Rho7 binds the GEF Pragmin and significantly stimulates RhoA activity and Rho-A mediated cell contraction. Rnd2/Rho7 is also found to be expressed in sperma

Probab=98.36 E-value=1.7e-05 Score=55.34 Aligned_cols=145 Identities=15% Similarity=0.205 Sum_probs=87.1 Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEE-EEEEEECC--EEEEEECCCCCCCCHHH Q ss_conf 9998546898778899999983961423220000038857798709606467-99999899--79999728987540799 Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAK-VTSIVWND--VRINIVDTPGHADFGGE 98 (624) Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~-~~~~~~~~--~~iNiiDTPGH~DF~gE 98 (624) T Consensus 4 iVlvGD~~VGKTsLl~~f~--~~~F~~~y----------------~pTi~~~~~~~~~vd~~~v~L~iWDTAGqE~y~~l 65 (222) T cd04173 4 IVVVGDAECGKTALLQVFA--KDAYPGSY----------------VPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNV 65 (222) T ss_pred EEEECCCCCCHHHHHHHHH--CCCCCCCC----------------CCCEEEEEEEEEEECCEEEEEEEECCCCCCHHHHH T ss_conf 9998989989899999996--39999984----------------78458778999999999999999768885034556 Q ss_pred HHHHHHHHCEEEEEEECCCCCCHHH----HHHHHHHHH---CCCCEEEEEECCCCCCCCHHHHHHHH------------- Q ss_conf 9999874217899997687886478----999999997---29978999975436674025689999------------- Q gi|254780233|r 99 VERILCMVESVVVLVDAAEGPMPQT----KFVVGKALK---IGLRPIVVVNKVDRSDARADEVINEV------------- 158 (624) Q Consensus 99 Ver~l~~~DgaiLvVdA~eGv~~QT----~~vl~~A~~---~~l~~IvvINKiDr~~a~~~~v~~ei------------- 158 (624) T Consensus 66 r~~yyr~a~~~llvfdit~~---~SF~~v~~~W~~ei~~~~p~~piiLVGnK~DLR~-d~-~~~~el~~~~~~pVt~eeg 140 (222) T cd04173 66 RPLAYPDSDAVLICFDISRP---ETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRT-DL-ATLRELSKQRLIPVTHEQG 140 (222) T ss_pred HHHHCCCCCEEEEEEECCCH---HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC-CH-HHHHHHHHCCCCCCCHHHH T ss_conf 78750369899999838977---8899999999999998589997899958742456-87-8899998557888789999 Q ss_pred HHHHHHCCCCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHH Q ss_conf 98886226730110426688788659164674223348641355532 Q gi|254780233|r 159 FDLFSALDATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLI 205 (624) Q Consensus 159 ~dlf~~l~a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~I 205 (624) T Consensus 141 ~~lA~~~ga------~~y~EcSAk~~----------~n~V~evF~~a 171 (222) T cd04173 141 TVLAKQVGA------VSYVECSSRSS----------ERSVRDVFHVA 171 (222) T ss_pred HHHHHHCCC------CEEEECCCCCC----------CCCHHHHHHHH T ss_conf 999997699------88998884868----------74989999999

HHsearch alignment for GI: 254780233 and conserved domain: cd04173