HHsearch alignment for GI: 254780233 and conserved domain: pfam09439
>pfam09439 SRPRB Signal recognition particle receptor beta subunit. The beta subunit of the signal recognition particle receptor (SRP) is a transmembrane GTPase which anchors the alpha subunit to the endoplasmic reticulum membrane.
Probab=98.98 E-value=1.9e-08 Score=74.73 Aligned_cols=124 Identities=21% Similarity=0.279 Sum_probs=77.7
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHH
Q ss_conf 14999854689877889999998396142322000003885779870960646799999899799997289875407999
Q gi|254780233|r 20 RNIAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEV 99 (624)
Q Consensus 20 RNiaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEV 99 (624)
T Consensus 4 ptvLllGl~~sGKT~Lf~~L~~--~~~------~~T~t-S~--~--~n~~----~~~~~~~~~~~~lvD~PGh~klR~~~ 66 (181)
T pfam09439 4 PAVIIAGLCDSGKTSLFTLLTT--GSV------RKTVT-SQ--E--PSAA----YKYMNNKGNSLTLIDFPGHVKLRYKL 66 (181)
T ss_pred CEEEEECCCCCCHHHHHHHHHC--CCC------CCEEC-CC--C--CCCE----EEEECCCCCEEEEEECCCCHHHHHHH
T ss_conf 8699986899989999999975--994------87588-86--7--8640----68751689668999889968999999
Q ss_pred HH---HHHHHCEEEEEEECCCC--CCHHHHHHHHHHH------HCCCCEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 99---98742178999976878--8647899999999------72997899997543667402568999998
Q gi|254780233|r 100 ER---ILCMVESVVVLVDAAEG--PMPQTKFVVGKAL------KIGLRPIVVVNKVDRSDARADEVINEVFD 160 (624)
Q Consensus 100 er---~l~~~DgaiLvVdA~eG--v~~QT~~vl~~A~------~~~l~~IvvINKiDr~~a~~~~v~~ei~d 160 (624)
T Consensus 67 ~~~~~~~~~~~gIVfVVDS~~~~~~l~~~Ae~Ly~iL~~~~~~~~~vPvLI~cNKqDl~~A~~~~~Ik~~LE 138 (181)
T pfam09439 67 LETLKDSSSLRGLVFVVDSTAFPKEVTDTAEFLYDILSITELLKNGIDILIACNKQEIFTARPPKKIKQALE 138 (181)
T ss_pred HHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 986430026449999997866566799999999999844543368997899973746335779999999999