HHsearch alignment for GI: 254780233 and conserved domain: smart00173
>smart00173 RAS Ras subfamily of RAS small GTPases. Similar in fold and function to the bacterial EF-Tu GTPase. p21Ras couples receptor Tyr kinases and G protein receptors to protein kinase cascades
Probab=99.08 E-value=2e-09 Score=81.08 Aligned_cols=151 Identities=19% Similarity=0.233 Sum_probs=96.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHHH
Q ss_conf 99985468987788999999839614232200000388577987096064679999989979999728987540799999
Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVER 101 (624)
Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVer 101 (624)
T Consensus 3 iv~vGd~~vGKTsli~r~~~--~~f~~~y--~~Ti~~~-----------~~k~i~~~~~~~~l~iwDt~G~e~~~~~~~~ 67 (164)
T smart00173 3 LVVLGSGGVGKSALTIQFVQ--GHFVDDY--DPTIEDS-----------YRKQIEIDGEVCLLDILDTAGQEEFSAMRDQ 67 (164)
T ss_pred EEEECCCCCCHHHHHHHHHH--CCCCCCC--CCCEEEE-----------EEEEEEECCEEEEEEEEECCCCCCHHHHHHH
T ss_conf 99999999789999999972--9799877--8813678-----------9999999999999999989997103567777
Q ss_pred HHHHHCEEEEEEECCCCCCHHHH---HHH-HHHHH----CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHCC
Q ss_conf 98742178999976878864789---999-99997----29978999975436674025689999988862267301104
Q gi|254780233|r 102 ILCMVESVVVLVDAAEGPMPQTK---FVV-GKALK----IGLRPIVVVNKVDRSDARADEVINEVFDLFSALDATDAQLD 173 (624)
Q Consensus 102 ~l~~~DgaiLvVdA~eGv~~QT~---~vl-~~A~~----~~l~~IvvINKiDr~~a~~~~v~~ei~dlf~~l~a~de~ld 173 (624)
T Consensus 68 ~~~~a~~~ilvydi~~---~~Sf~~~~~~~~~i~~~~~~~~~piilvgnK~DL~~~r~V-~~~e~~~~a~~-------~~ 136 (164)
T smart00173 68 YMRTGEGFLLVYSITD---RQSFEEIKKFREQILRVKDRDDVPIVLVGNKCDLESERVV-STEEGKELARQ-------WG 136 (164)
T ss_pred HCCCCCEEEEEEECCC---HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHCCCC-CHHHHHHHHHH-------CC
T ss_conf 5379877999830798---8999999999999998618888866877753463011789-99999999998-------39
Q ss_pred HHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf 266887886591646742233486413555321024
Q gi|254780233|r 174 FPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHV 209 (624)
Q Consensus 174 ~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~i 209 (624)
T Consensus 137 ~~~~E~SAk~g-----------~nV~~~F~~l~~~i 161 (164)
T smart00173 137 CPFLETSAKER-----------VNVDEAFYDLVREI 161 (164)
T ss_pred CEEEEECCCCC-----------CCHHHHHHHHHHHH
T ss_conf 98999858988-----------17899999999999