HHsearch alignment for GI: 254780233 and conserved domain: smart00174
>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=98.98 E-value=8e-09 Score=77.12 Aligned_cols=159 Identities=15% Similarity=0.128 Sum_probs=91.3
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEECCEEEEEECCCCCCCCHHHHHH
Q ss_conf 99985468987788999999839614232200000388577987096064679999989979999728987540799999
Q gi|254780233|r 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKERGITILAKVTSIVWNDVRINIVDTPGHADFGGEVER 101 (624)
Q Consensus 22 iaIiaHvDhGKTTL~d~LL~~sG~~~~~~~v~~~vmD~~~~EreRGITI~a~~~~~~~~~~~iNiiDTPGH~DF~gEVer 101 (624)
T Consensus 1 ivllGd~~VGKTsli~r~~--~~~f~~~y~--~Ti~-----------~~~~~~~~~~~~~~~l~i~DtaG~e~~~~l~~~ 65 (174)
T smart00174 1 LVVVGDGAVGKTCLLISYT--TNAFPEDYV--PTVF-----------ENYSADVEVDGKPVELGLWDTAGQEDYDRLRPL 65 (174)
T ss_pred EEEECCCCCCHHHHHHHHH--HCCCCCCCC--CCEE-----------EEEEEEEEECCEEEEEEEEECCCCCCCCCCCHH
T ss_conf 5998978975999999995--398999857--8505-----------789999999999999999948987034545001
Q ss_pred HHHHHCEEEEEEECCCCCCHHH-HHHHHHHH---HCCCCEEEEEECCCCCCCCH--HH--------H-HHHHHHHHHHCC
Q ss_conf 9874217899997687886478-99999999---72997899997543667402--56--------8-999998886226
Q gi|254780233|r 102 ILCMVESVVVLVDAAEGPMPQT-KFVVGKAL---KIGLRPIVVVNKVDRSDARA--DE--------V-INEVFDLFSALD 166 (624)
Q Consensus 102 ~l~~~DgaiLvVdA~eGv~~QT-~~vl~~A~---~~~l~~IvvINKiDr~~a~~--~~--------v-~~ei~dlf~~l~ 166 (624)
T Consensus 66 ~~~~a~~~ilvydvt~~~Sf~~~~~~w~~~i~~~~~~~piilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~a~~~~ 145 (174)
T smart00174 66 SYPDTDVFLICFSVDSPASFENVKEKWYPEVKHFCPNTPIILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEALAKRIG 145 (174)
T ss_pred HCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
T ss_conf 10488689999758987899999998999999868898699998754250123335455331465002999999999839
Q ss_pred CCHHHCCHHHHHHHHHCCEECCCCCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 7301104266887886591646742233486413555321024542
Q gi|254780233|r 167 ATDAQLDFPILYGSGRFGWMSDSSDGSRDQGMVPLLNLIVDHVPPP 212 (624)
Q Consensus 167 a~de~ld~Pv~~~Sa~~G~~~~~~~~~~~~gl~~Lld~Ii~~iP~P 212 (624)
T Consensus 146 ~------~~y~EtSAk~g-----------~nV~e~F~~l~r~~l~p 174 (174)
T smart00174 146 A------VKYLECSALTQ-----------EGVREVFEEAIRAALNP 174 (174)
T ss_pred C------CEEEEECCCCC-----------CCHHHHHHHHHHHHHCC
T ss_conf 9------78999645889-----------49899999999997294