RPSBLAST alignment for GI: 254780233 and conserved domain: cd01887
>gnl|CDD|133287 cd01887, IF2_eIF5B, IF2/eIF5B (initiation factors 2/ eukaryotic initiation factor 5B) subfamily. IF2/eIF5B contribute to ribosomal subunit joining and function as GTPases that are maximally activated by the presence of both ribosomal subunits. As seen in other GTPases, IF2/IF5B undergoes conformational changes between its GTP- and GDP-bound states. Eukaryotic IF2/eIF5Bs possess three characteristic segments, including a divergent N-terminal region followed by conserved central and C-terminal segments. This core region is conserved among all known eukaryotic and archaeal IF2/eIF5Bs and eubacterial IF2s. Length = 168
Score = 71.8 bits (177), Expect = 6e-13
Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 33/147 (22%)
Query: 22 IAIIAHVDHGKTTLVDELLKQSGVFRDNQRVSERVMDCNDLEKE-RGIT--ILA-KVTSI 77
+ ++ HVDHGKTTL+D++ K N E GIT I A +V +
Sbjct: 3 VTVMGHVDHGKTTLLDKIRK-----------------TNVAAGEAGGITQHIGAFEVPAE 45
Query: 78 VWNDVRINIVDTPGHADF------GGEVERILCMVESVVVLVDAAEGPMPQTKFVVGKAL 131
V I +DTPGH F G + I +++V A +G MPQT + A
Sbjct: 46 VLKIPGITFIDTPGHEAFTNMRARGASLTDI------AILVVAADDGVMPQTIEAIKLAK 99
Query: 132 KIGLRPIVVVNKVDRSDARADEVINEV 158
+ IV +NK+D+ +A + V NE+
Sbjct: 100 AANVPFIVALNKIDKPNANPERVKNEL 126