HHsearch alignment for GI: 254780234 and conserved domain: COG0301

>COG0301 ThiI Thiamine biosynthesis ATP pyrophosphatase [Coenzyme metabolism].
Probab=98.19  E-value=0.00026  Score=51.20  Aligned_cols=149  Identities=23%  Similarity=0.350  Sum_probs=98.6

Q ss_pred             CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC-CCH--HHHHHHHH-HHCC----CEEEEEECHHHHHHHHHHHH
Q ss_conf             7899991477259999999987189869999945787-110--68999999-9739----80799820089999987999
Q gi|254780234|r    6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ-GEE--LKIASDKA-RLLG----AKEVYVKDLRREFVRDFVFP   77 (404)
Q Consensus         6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq-~~d--~~~~~~~A-~~~G----a~~~~v~D~r~ef~~~~i~~   77 (404)
T Consensus       176 Gk~l~LlSGGIDSPVA-~~l~mkRG~~v~~v~f~~~p~~~~~a~~k~~~l~~~~~~~~~~~~~~~~v~f~~v~-~~i~-~  252 (383)
T COG0301         176 GKVLLLLSGGIDSPVA-AWLMMKRGVEVIPVHFGNPPYTSEKAREKVVALALLRLTSYGGKVRLYVVPFTEVQ-EEIL-E  252 (383)
T ss_pred             CCEEEEEECCCCHHHH-HHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHH-HHHH-H
T ss_conf             7489997078774999-99998569877999972799851889999999986430246872289997629999-9998-6


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECH-HHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHH
Q ss_conf             973686547874201301243359999999885689287500-1116821567999999858797077441006876379
Q gi|254780234|r   78 MFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHG-STGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQ  156 (404)
Q Consensus        78 ~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG-~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe  156 (404)
T Consensus       253 ~~--~---~~-y~--~v~~rR~M~riA~~iae~~g~~aIvtGEsLGQVASQTl~nL~~i~~~t~~pIlRPLI--~~D-K~  321 (383)
T COG0301         253 KV--P---ES-YR--CVLLKRMMYRIAEKLAEEFGAKAIVTGESLGQVASQTLENLRVIDSVTNTPVLRPLI--GLD-KE  321 (383)
T ss_pred             HC--C---CC-CE--EHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEECCCC--CCC-HH
T ss_conf             36--7---53-02--047899999999999998398399836861046676788899998155874231445--799-89


Q ss_pred             HHHHHHHHHCCC
Q ss_conf             999999970896
Q gi|254780234|r  157 DLIDFAEKHAIP  168 (404)
Q Consensus       157 ~~i~ya~~~gIp  168 (404)
T Consensus       322 eIi~~Ar~IgT~  333 (383)
T COG0301         322 EIIEIARRIGTY  333 (383)
T ss_pred             HHHHHHHHHCCH
T ss_conf             999999982974