HHsearch alignment for GI: 254780234 and conserved domain: PRK00876

Probab=97.19  E-value=0.0027  Score=43.91  Aligned_cols=159  Identities=21%  Similarity=0.257  Sum_probs=91.3

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHCCC-EEEEEEEEC--CCCCHHHHHHHHHHHCCCEEEEEECHHHHHHH--------
Q ss_conf             7778999914772599999999871898-699999457--87110689999999739807998200899999--------
Q gi|254780234|r    4 DVKKVVLAYSGGLDTSIILKWLQVEKGL-EVIVFIADL--GQGEELKIASDKARLLGAKEVYVKDLRREFVR--------   72 (404)
Q Consensus         4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~-eVi~~~~d~--Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~--------   72 (404)
T Consensus        32 ~~kG~VlGlSGGIDSAv~a~Lav~AlG~e~V~gl~MP~~~s~~~s~~~a~~la~~lGi-~~~~idI~~~l~~~~~y~~~d  110 (325)
T PRK00876         32 KRRGVVLGLSGGIDSSVTLALCVRALGKDRVLGLLMPERDSSPDSLRLGRMLAESLGV-EYVVEDISPALEALGCYERRD  110 (325)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC-CEEEEECHHHHHHHHHHHHHH
T ss_conf             9867999687688899999999997485516999788656887789999999998199-359984489998754313568


Q ss_pred             HH---HHHH---------HHCCCCCCCCCCC---------C------CCHHH--------HHHH--H--HHHHHHHHCCC
Q ss_conf             87---9999---------7368654787420---------1------30124--------3359--9--99999885689
Q gi|254780234|r   73 DF---VFPM---------FRANALYEGYYLL---------G------TAIAR--------PLIA--K--YLVDIANETGA  113 (404)
Q Consensus        73 ~~---i~~~---------I~ana~Yeg~Ypl---------~------tslaR--------plia--~--~lv~~a~~~ga  113 (404)
T Consensus       111 ~~i~~~~p~~~~~~~~~i~~~~~l~~~~~~~~~l~~~~~~~~~~~~~l~~~~~l~~~a~~NiKaR~RM~~lY~~A~~~n~  190 (325)
T PRK00876        111 EAIRRVVPEYGPGWKSKLVLPNFLEGDLLNVPYLVVQDPGGEVRKKRLPPADYLQIVAATNFKQRTRKMVEYYHADRLNY  190 (325)
T ss_pred             HHHHHHCCCCCCCHHCCCCCCCHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
T ss_conf             88875033324200000002311102322310121046421000013550344445553233689999999999987398


Q ss_pred             CEEECHHHCCCCHHHHHHHHHHHHCCCCEE-EEEECCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             287500111682156799999985879707-74410068763799999999708967566
Q gi|254780234|r  114 DAIAHGSTGKGNDQVRFELSAYSLNSDIEI-IAPWRHWSFKGRQDLIDFAEKHAIPIDKN  172 (404)
Q Consensus       114 ~~iaHG~TgkGNDQvRFe~~~~~l~P~l~v-iaP~Rd~~~~sRe~~i~ya~~~gIpv~~~  172 (404)
T Consensus       191 lVl-----GT~NksE-~~~GyfTKyGDGa~Di~PI~~--Ly-KtQV~~LA~~LgvPe~Ii  241 (325)
T PRK00876        191 AVA-----GTPNRLE-YDQGFFVKYGDGAADLKPIAH--LY-KTQVYALAEYLGVPEEIR  241 (325)
T ss_pred             EEE-----CCCCHHH-HHHCCEEEECCCCCCCCCCCC--CC-HHHHHHHHHHCCCCHHHH
T ss_conf             776-----5884655-663514754478878451357--75-899999999809999993