HHsearch alignment for GI: 254780234 and conserved domain: PRK01565
>PRK01565 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.12 E-value=0.00036 Score=50.20 Aligned_cols=148 Identities=20% Similarity=0.309 Sum_probs=98.9
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC---CCHHHHHHHHHH---H-CCCEEEEEECHHHHHHHHHHHHH
Q ss_conf 7899991477259999999987189869999945787---110689999999---7-39807998200899999879999
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ---GEELKIASDKAR---L-LGAKEVYVKDLRREFVRDFVFPM 78 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq---~~d~~~~~~~A~---~-~Ga~~~~v~D~r~ef~~~~i~~~ 78 (404)
T Consensus 177 Gk~l~LlSGGIDSPVA-a~~mmkRG~~v~~v~f~~~p~t~~~a~~kv~~l~~~L~~y~~~~kl~~v~f~~-~~~-----~ 249 (399)
T PRK01565 177 GKALLLLSGGIDSPVA-GYLAMKRGVEIEAVHFHSPPYTSERAKEKVIDLARILAKYGGRIKLHVVPFTE-IQE-----E 249 (399)
T ss_pred CCEEEEECCCCCHHHH-HHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH-HHH-----H
T ss_conf 8579986178753999-99998559879999986899877899999999999999728885599966399-999-----9
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECH-HHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHH
Q ss_conf 73686547874201301243359999999885689287500-11168215679999998587970774410068763799
Q gi|254780234|r 79 FRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHG-STGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQD 157 (404)
Q Consensus 79 I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG-~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~ 157 (404)
T Consensus 250 i~~~~--~~~~--~~vl~RR~M~riA~~iA~~~~~~alvTGESLGQVASQTl~Nl~~i~~~~~~pVlRPLI--g~D-K~E 322 (399)
T PRK01565 250 IKKKV--PESY--LMTLMRRFMMRIADKIAEKRGALAIVTGESLGQVASQTLESMQAINAVTNLPVLRPLI--GMD-KEE 322 (399)
T ss_pred HHHCC--CCCE--EEHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCC-HHH
T ss_conf 98608--8003--8599999999999999998599789824135567675567788887521775446655--789-899
Q ss_pred HHHHHHHHCC
Q ss_conf 9999997089
Q gi|254780234|r 158 LIDFAEKHAI 167 (404)
Q Consensus 158 ~i~ya~~~gI 167 (404)
T Consensus 323 II~~Ar~IGT 332 (399)
T PRK01565 323 IIEIAKEIGT 332 (399)
T ss_pred HHHHHHHCCC
T ss_conf 9999987096