HHsearch alignment for GI: 254780234 and conserved domain: PRK08576

Probab=98.12  E-value=0.00017  Score=52.51  Aligned_cols=139  Identities=18%  Similarity=0.229  Sum_probs=91.6

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCC
Q ss_conf             899991477259999999987189869999945787--110689999999739807998200899999879999736865
Q gi|254780234|r    7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANAL   84 (404)
Q Consensus         7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~   84 (404)
T Consensus       237 ~iiVp~SGGKDStA~LlLA~ea~~-dv~aVfvDTGlEfPeT~eyVe~va~klGv-~lv~a~~d~~~------~-i~~~G~  307 (439)
T PRK08576        237 TIIVPWSGGKDSTAALLLALKAFD-EVTAVYVDTGYEMPLTDEYVEKVAEKLGV-DLIRAGVDVPM------P-IEGYGL  307 (439)
T ss_pred             CEEEECCCCHHHHHHHHHHHHHHC-CEEEEEEECCCCCHHHHHHHHHHHHHHCC-EEEEECCCCCC------H-HCCCCC
T ss_conf             889956887799999999998618-83699970798657589999999998597-69994788642------2-104799


Q ss_pred             --CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCC----------CCEEEEEECCCCC
Q ss_conf             --4787420130124335999999988568928750011168215679999998587----------9707744100687
Q gi|254780234|r   85 --YEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNS----------DIEIIAPWRHWSF  152 (404)
Q Consensus        85 --Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P----------~l~viaP~Rd~~~  152 (404)
T Consensus       308 Pt~d~R--WCtk~----KL~PL~~~i~~~~~~l~~v-------G~R~~ES~~R~~~~~v~~rn~~vg~~~~~~PIk~Ws-  373 (439)
T PRK08576        308 PTHENR--WCTKM----KVEALYEAIRELSNPLLVV-------GDRDGESARRRLRPPVRERETDFGKILVVMPLKFWS-  373 (439)
T ss_pred             CCCCCC--CCCCC----CCHHHHHHHHHHCCCEEEE-------CCCHHHHHHHHCCCCEEECCCCCCCCEEEECHHHCC-
T ss_conf             976663--31020----0255899999648976995-------272565477611896355047777726672343076-


Q ss_pred             CCHHHHHHHHHHHCCCCC
Q ss_conf             637999999997089675
Q gi|254780234|r  153 KGRQDLIDFAEKHAIPID  170 (404)
Q Consensus       153 ~sRe~~i~ya~~~gIpv~  170 (404)
T Consensus       374 --a~~VwLYI~~~gip~N  389 (439)
T PRK08576        374 --GAMVQLYILMNGIELN  389 (439)
T ss_pred             --HHHHHHHHHHCCCCCC
T ss_conf             --9999999997599998