HHsearch alignment for GI: 254780234 and conserved domain: PRK10660

>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional.
Probab=98.87  E-value=1.2e-07  Score=75.24  Aligned_cols=162  Identities=17%  Similarity=0.202  Sum_probs=95.9

Q ss_pred             CCCCEEEEEECCCHHHHHHHHHH---HHHC-CCEEEEEEEECCC-C---CHHHHHHHHHHHCCCEEEEEECHHHHHHHHH
Q ss_conf             77778999914772599999999---8718-9869999945787-1---1068999999973980799820089999987
Q gi|254780234|r    3 RDVKKVVLAYSGGLDTSIILKWL---QVEK-GLEVIVFIADLGQ-G---EELKIASDKARLLGAKEVYVKDLRREFVRDF   74 (404)
Q Consensus         3 ~~~kkVvlaySGGLDTSv~i~~L---~~e~-g~eVi~~~~d~Gq-~---~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~   74 (404)
T Consensus        11 ~~~~~ilvavSGG~DS~~LL~~L~~l~~~~~~~~l~~~HvnHgl~~~ad~~~~fv~~~c~~~~i-p~~~~~~~v------   83 (433)
T PRK10660         11 LESRQILVAFSGGLDSTVLLHQLVQWRTQNPGVTLRAIHIHHGLSPNADSWVKHCEQVCQQWQV-PLVVERVQL------   83 (433)
T ss_pred             CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCC-CEEEEEEEE------
T ss_conf             9999899997280999999999999998668982899997189792669999999999997599-789999872------


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHH--HHHHHHHHCCC-CEEEEEECC--
Q ss_conf             9999736865478742013012433599999998856892875001116821567--99999985879-707744100--
Q gi|254780234|r   75 VFPMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVR--FELSAYSLNSD-IEIIAPWRH--  149 (404)
Q Consensus        75 i~~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvR--Fe~~~~~l~P~-l~viaP~Rd--  149 (404)
T Consensus        84 -----~~----~~~--~~E~aAR~~RY~~f~~~~~~~~~l~tAH----h~dDQaETvLlrL~RGsG~~GL~gm~~~r~~~  148 (433)
T PRK10660         84 -----AQ----EGL--GIEAAARQARYQAFARTLLPGEVLVTAQ----HLDDQCETFLLALKRGSGPAGLSAMAEVSPFA  148 (433)
T ss_pred             -----CC----CCC--CHHHHHHHHHHHHHHHHHHHCCEEEECC----CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             -----79----997--6999999999999999874388799624----56519999999986589964456775224478


Q ss_pred             -------C-CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf             -------6-87637999999997089675665678864157243115
Q gi|254780234|r  150 -------W-SFKGRQDLIDFAEKHAIPIDKNKRGEAPFSIDTNLLHS  188 (404)
Q Consensus       150 -------~-~~~sRe~~i~ya~~~gIpv~~~~~~~~~yS~D~Nlwg~  188 (404)
T Consensus       149 ~~~liRPLL~~-~r~eI~~Y~~~~~l~~~eD~SN~-d~~y~RN~iR~  193 (433)
T PRK10660        149 GTQLLRPLLAR-TRGELEQWAQAHGLRWIEDESNQ-DDRYDRNFLRL  193 (433)
T ss_pred             CCEEECCCHHH-HHHHHHHHHHHCCCCCEECCCCC-CCCCCHHHHHH
T ss_conf             97077374466-59999999998499803899999-76112599999