HHsearch alignment for GI: 254780234 and conserved domain: cd01712

>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide.
Probab=99.21  E-value=2.4e-09  Score=87.42  Aligned_cols=150  Identities=22%  Similarity=0.272  Sum_probs=98.9

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCC---HHH---HHHHHHHHCCC-EEEEEECHHHHHHHHHHHHHH
Q ss_conf             89999147725999999998718986999994578711---068---99999997398-079982008999998799997
Q gi|254780234|r    7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGE---ELK---IASDKARLLGA-KEVYVKDLRREFVRDFVFPMF   79 (404)
Q Consensus         7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~---d~~---~~~~~A~~~Ga-~~~~v~D~r~ef~~~~i~~~I   79 (404)
T Consensus         1 kvl~L~SGGiDS~VAa~ll-~krG~~V~~l~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~   74 (177)
T cd01712           1 KALALLSGGIDSPVAAWLL-MKRGIEVDALHFNSGPFTSEKAREKVEDLARKLARYSPGHKLVVIIFTFF-----VQKEI   74 (177)
T ss_pred             CEEEEECCCCHHHHHHHHH-HHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHH-----HHHHH
T ss_conf             9899957781699999999-98799899999989998888999999999999999489962899945389-----99999


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHH-HCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHH
Q ss_conf             36865478742013012433599999998856892875001-11682156799999985879707744100687637999
Q gi|254780234|r   80 RANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGS-TGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDL  158 (404)
Q Consensus        80 ~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~-TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~  158 (404)
T Consensus        75 ~~----~g~~~npcv~ckr~m~r~a~~~A~~~ga~~IvTGe~lGQvasqt~~nl~~i~~~~~~~ilRPL~--~~d-K~EI  147 (177)
T cd01712          75 YG----YGKEKYRCILCKRMMYRIAEKLAEELGADAIVTGESLGQVASQTLENLLVISSGTDLPILRPLI--GFD-KEEI  147 (177)
T ss_pred             HH----HCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCC-HHHH
T ss_conf             97----0888898636299999999999998699899866522204476899999998742564214888--999-8999


Q ss_pred             HHHHHHHCC-CC
Q ss_conf             999997089-67
Q gi|254780234|r  159 IDFAEKHAI-PI  169 (404)
Q Consensus       159 i~ya~~~gI-pv  169 (404)
T Consensus       148 ~~~A~~igt~~~  159 (177)
T cd01712         148 IGIARRIGTYDI  159 (177)
T ss_pred             HHHHHHHCCHHH
T ss_conf             999998096744