HHsearch alignment for GI: 254780234 and conserved domain: pfam02568
>pfam02568 ThiI Thiamine biosynthesis protein (ThiI). ThiI is required for thiazole synthesis, required for thiamine biosynthesis.
Probab=98.88 E-value=2.1e-07 Score=73.39 Aligned_cols=148 Identities=22% Similarity=0.363 Sum_probs=102.3
Q ss_pred CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--C-CHHHHHHHHHHHC---C---CEEEEEECHHHHHHHHHHH
Q ss_conf 7899991477259999999987189869999945787--1-1068999999973---9---8079982008999998799
Q gi|254780234|r 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--G-EELKIASDKARLL---G---AKEVYVKDLRREFVRDFVF 76 (404)
Q Consensus 6 kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~-~d~~~~~~~A~~~---G---a~~~~v~D~r~ef~~~~i~ 76 (404)
T Consensus 4 gk~l~LlSGGiDSpVA-a~lmmkRG~~V~~vhf~~~p~~~~~~~~k~~~l~~~l~~y~~~~~~~l~vv~~~~~~~-~--- 78 (197)
T pfam02568 4 GKVLALLSGGIDSPVA-AYLMMRRGCRVVALHFINEPGTSEEAIEKVRKLAELLAEYGTSCEGKLVVVDFTKVQK-E--- 78 (197)
T ss_pred CCEEEEECCCCHHHHH-HHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHH-H---
T ss_conf 7189886687129999-9999987997999998799999899999999999999973788754499957499999-9---
Q ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHH-HCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCH
Q ss_conf 99736865478742013012433599999998856892875001-11682156799999985879707744100687637
Q gi|254780234|r 77 PMFRANALYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGS-TGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGR 155 (404)
Q Consensus 77 ~~I~ana~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~-TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sR 155 (404)
T Consensus 79 --i~~~~--~~~~~--cv~cKr~M~r~A~~iA~~~ga~~IVTGEsLGQVaSQTl~nl~~i~~~~~~pilRPLi--g~D-K 149 (197)
T pfam02568 79 --IIEKA--PEKYR--CVLCKRCMYRAAEKVAEEEGADALVTGESLGQVASQTLDNLRVISAATNLPILRPLI--GLD-K 149 (197)
T ss_pred --HHHCC--CCCCE--EHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCC--CCC-H
T ss_conf --99628--98765--456999999999999998499899847303121004531069998762485313434--699-9
Q ss_pred HHHHHHHHHHCC
Q ss_conf 999999997089
Q gi|254780234|r 156 QDLIDFAEKHAI 167 (404)
Q Consensus 156 e~~i~ya~~~gI 167 (404)
T Consensus 150 ~EIi~~Ar~IGt 161 (197)
T pfam02568 150 EEIINLAKEIGT 161 (197)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999486