HHsearch results for GI: 254780234 and protein with PDBid: 1kor_A

>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=100.00  E-value=0  Score=1176.40  Aligned_cols=394  Identities=60%  Similarity=1.016  Sum_probs=388.5

Q ss_pred             EEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             89999147725999999998718986999994578711068999999973980799820089999987999973686547
Q gi|254780234|r    7 KVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANALYE   86 (404)
Q Consensus         7 kVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~Ye   86 (404)
                      |||||||||||||||++||+++||+|||||++|+||++|++.+++||.++||++++++|+|+||+++||||+|+|||+||
T Consensus         2 KVvLAySGGLDTSv~l~wL~e~~~~eVi~~~~d~Gq~~d~~~i~~kA~~~GA~~~~v~D~r~ef~~~~i~p~i~ana~Ye   81 (400)
T 1kor_A            2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQGEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAVYE   81 (400)
T ss_dssp             EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSCSSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCCBT
T ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCC
T ss_conf             69999489817999999997405988999997088667669999999984998899975799999999999997386557


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHC
Q ss_conf             87420130124335999999988568928750011168215679999998587970774410068763799999999708
Q gi|254780234|r   87 GYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLIDFAEKHA  166 (404)
Q Consensus        87 g~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i~ya~~~g  166 (404)
                      |+|||+|||+|||||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+|.||+++|+||++||
T Consensus        82 ~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvRFe~~~~al~P~l~iiaPwRd~~~~sR~~~i~ya~~~g  161 (400)
T 1kor_A           82 GYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELTAYALKPDIKVIAPWREWSFQGRKEMIAYAEAHG  161 (400)
T ss_dssp             TTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTCEEECGGGTCCCCSHHHHHHHHHHTT
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCHHCCCCCHHHHHHHHHHCC
T ss_conf             87623454106479999999985449769943777578723668889997599974850101025366799999999849


Q ss_pred             CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEECCEECCHHHHH
Q ss_conf             96756656788641572431154576324584576820100146581227999638999995024787516231899999
Q gi|254780234|r  167 IPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAINGQVMSPEVLL  246 (404)
Q Consensus       167 Ipv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVainG~~~~~~~li  246 (404)
                      ||++++++  +|||+|+||||+|+|||+|||||++||+++|.||++|++|||+|++|+|+|++|+||+|||++++|++||
T Consensus       162 Ipv~~~~~--~~yS~D~NLwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~apd~pe~v~I~Fe~G~Pv~ing~~~~~~eli  239 (400)
T 1kor_A          162 IPVPVTQE--KPYSMDANLLHISYEGGVLEDPWAEPPKGMFRMTQDPEEAPDAPEYVEVEFFEGDPVAVNGERLSPAALL  239 (400)
T ss_dssp             CCCC-------CCEEEECSSCEEEESGGGGCTTSCCCTTCCSSSCCGGGSCSSCEEEEEEEETTEEEEETTEECCHHHHH
T ss_pred             CCCCCCCC--CCCCCCCCHHCEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCEEEEECCCCCCHHHHH
T ss_conf             99865678--8875465533022267664587766551213455796678998769876756566887678057899999


Q ss_pred             HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf             99988864216374100077320210001113737899999999998650899999999999999999875351469899
Q gi|254780234|r  247 EQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSRYASIVYQGFWFSPER  326 (404)
Q Consensus       247 ~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~~a~lvy~G~wf~p~~  326 (404)
                      ++||+|||+|||||+||||||+|||||||||||||++||++|||+||++||||+++++|++++++|++|||+|+||||+|
T Consensus       240 ~~LN~i~g~~GIGr~d~vEnr~vG~KsR~vYEaPg~tiL~~AHr~LE~~tLdr~~~~~K~~l~~~~a~lvY~G~wfsP~r  319 (400)
T 1kor_A          240 QRLNEIGGRHGVGRVDIVENRFVGMKSRGVYETPGGTILYHARRAVESLTLDREVLHQRDMLSPKYAELVYYGFWYAPER  319 (400)
T ss_dssp             HHHHHHHHHTTCCEEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTCSSSHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             99998742312153230054202542354226827999999999999871779999999999999999985461678899


Q ss_pred             HHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCC
Q ss_conf             99999999972336739999990615999877278310883222301577878887854788870334898884178
Q gi|254780234|r  327 EMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLHALRLRTLARRNK  403 (404)
Q Consensus       327 ~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~~l~~~~~~~~~k  403 (404)
                      ++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|++|++|++++++|
T Consensus       320 ~~l~afi~~tq~~VtG~V~lkLykG~~~v~gr~S~~sLY~~~~as~~~~-~~~~~~da~GFi~i~~l~~k~~a~~~~  395 (400)
T 1kor_A          320 EALQAYFDHVARSVTGVARLKLYKGNVYVVGRKAPKSLYRQDLVSFDEA-GGYDQKDAEGFIKIQALRLRVRALVER  395 (400)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEECTTCCCC-----------CCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             9999999996395369999999788389998789620158623415689-997968807889974688999999864