HHsearch results for GI: 254780234 and protein with PDBid: 1vl2_A

>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=100.00  E-value=0  Score=1141.58  Aligned_cols=395  Identities=52%  Similarity=0.883  Sum_probs=385.4

Q ss_pred             CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCC
Q ss_conf             77899991477259999999987189869999945787110689999999739807998200899999879999736865
Q gi|254780234|r    5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANAL   84 (404)
Q Consensus         5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~   84 (404)
                      +||||||||||||||||++||+ |+||||||||+|+||++|++.+++||.++||++++++|+|+||+++||+|+|+|||+
T Consensus        14 k~KVvlAySGGLDTSv~l~~L~-e~g~eVi~~~~d~Gq~ed~~~~~~kA~~~GA~~~~v~D~r~ef~~~~i~p~I~ana~   92 (421)
T 1vl2_A           14 KEKVVLAYSGGLDTSVILKWLC-EKGFDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAM   92 (421)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTCC
T ss_pred             CCEEEEEECCCHHHHHHHHHHH-HCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCC
T ss_conf             3709999388748999999998-779979999997997677899999999849968999860999999999999966887


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC----CCHHHHHH
Q ss_conf             47874201301243359999999885689287500111682156799999985879707744100687----63799999
Q gi|254780234|r   85 YEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF----KGRQDLID  160 (404)
Q Consensus        85 Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~----~sRe~~i~  160 (404)
                      |||.|||+|||+|||||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+|    .+|+++++
T Consensus        93 ye~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvRFe~~~~aL~p~~~iiaP~R~~~~~~~~~~R~~~i~  172 (421)
T 1vl2_A           93 YEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLAKFKGRTDLIN  172 (421)
T ss_dssp             BTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTSEEECGGGCHHHHHHTC--CHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
T ss_conf             67865342111158999999999997087488336524777541077779872897631585666656542011999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEECC---
Q ss_conf             99970896756656788641572431154576324584576820100146581227999638999995024787516---
Q gi|254780234|r  161 FAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAING---  237 (404)
Q Consensus       161 ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVainG---  237 (404)
                      ||++||||++++++  +|||+|+||||+|+|||+|||||++||+++|.||++|++||++|++|+|+|++|+||+|||   
T Consensus       173 ya~~~gI~v~~~~~--~pyS~D~NLwg~S~Egg~Ledp~~~ppe~~~~~t~~p~~ap~~p~~v~I~Fe~G~PV~ing~~~  250 (421)
T 1vl2_A          173 YAMEKGIPIKVSKK--RPYSEDENLMHISHEAGKLEDPAHIPDEDVFTWTVSPKDAPDEETLLEIHFENGIPVKVVNLKD  250 (421)
T ss_dssp             HHHHHTCCCCSSCC--CSSEEEECSSCEEEESGGGGSTTSCCCGGGCCSSCCTTTSCSSCEEEEEEEETTEEEEEEETTT
T ss_pred             HHHHCCCCCCCCCC--CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCEEEEEECCCC
T ss_conf             99975999731137--8863363620242245653445558982001356794359997732546886675589951678


Q ss_pred             --EECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf             --231899999999888642163741000773202100011137378999999999986508999999999999999998
Q gi|254780234|r  238 --QVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSRYASI  315 (404)
Q Consensus       238 --~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~~a~l  315 (404)
                        ++++|++||++||+|||+|||||+||||||+|||||||||||||++||++|||+||++||||+++++|++++++|++|
T Consensus       251 ~~~~~~~~~li~~lN~i~g~~GiGR~d~vEnr~vG~KsR~vyEaPa~~iL~~AHr~LE~~~Ldr~~~~~K~~l~~~~a~l  330 (421)
T 1vl2_A          251 GTEKTDPLELFEYLNEVGAKNGVGRLDMVENRFIGIKSRGVYETPGATILWIAHRDLEGITMDKEVMHLRDMLAPKFAEL  330 (421)
T ss_dssp             CCEECSHHHHHHHHHHHHHHTTCCEEEEEEECSSSSEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCEECCEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf             74118999999999998555213751014640114010542368089999999999986407699999999999999999


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHH
Q ss_conf             75351469899999999999723367399999906159998772783108832223015778788878547888703348
Q gi|254780234|r  316 VYQGFWFSPEREMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLHALRL  395 (404)
Q Consensus       316 vy~G~wf~p~~~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~~l~~  395 (404)
                      ||+|+||||+|++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|+||++
T Consensus       331 vY~G~wfsP~~~~l~afi~~sq~~VtG~V~lkLykG~~~v~gr~S~~sLy~~~~as~~~~-~~~~~~da~GFi~i~~l~~  409 (421)
T 1vl2_A          331 IYNGFWFSPEMEFLLAAFRKAQENVTGKVTVSIYKGNVMPVARYSPYSLYNPELSSMDVE-GGFDATDSKGFINIHALRL  409 (421)
T ss_dssp             HHHTCTTSHHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEECSSSTTCC---------CCCCHHHHHHHHHHHHHHH
T ss_pred             HHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCHHH
T ss_conf             850345788999999999997596169999999898499998628720258623444579-9829788068899734999


Q ss_pred             HHHHHCCC
Q ss_conf             98884178
Q gi|254780234|r  396 RTLARRNK  403 (404)
Q Consensus       396 ~~~~~~~k  403 (404)
                      |++++++|
T Consensus       410 k~~~~~~k  417 (421)
T 1vl2_A          410 KVHQLVKK  417 (421)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHHC
T ss_conf             99999855