HHsearch results for GI: 254780234 and protein with PDBid: 1vl2_A
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=100.00 E-value=0 Score=1141.58 Aligned_cols=395 Identities=52% Similarity=0.883 Sum_probs=385.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCCC
Q ss_conf 77899991477259999999987189869999945787110689999999739807998200899999879999736865
Q gi|254780234|r 5 VKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANAL 84 (404)
Q Consensus 5 ~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana~ 84 (404)
+||||||||||||||||++||+ |+||||||||+|+||++|++.+++||.++||++++++|+|+||+++||+|+|+|||+
T Consensus 14 k~KVvlAySGGLDTSv~l~~L~-e~g~eVi~~~~d~Gq~ed~~~~~~kA~~~GA~~~~v~D~r~ef~~~~i~p~I~ana~ 92 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLC-EKGFDVIAYVANVGQKDDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLGNAM 92 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHH-HTTCEEEEEEEESSCCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTTTCC
T ss_pred CCEEEEEECCCHHHHHHHHHHH-HCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCCC
T ss_conf 3709999388748999999998-779979999997997677899999999849968999860999999999999966887
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC----CCHHHHHH
Q ss_conf 47874201301243359999999885689287500111682156799999985879707744100687----63799999
Q gi|254780234|r 85 YEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSF----KGRQDLID 160 (404)
Q Consensus 85 Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~----~sRe~~i~ 160 (404)
|||.|||+|||+|||||+++|++|+++||++||||||||||||||||+++++|+|+++||||||||+| .+|+++++
T Consensus 93 ye~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvRFe~~~~aL~p~~~iiaP~R~~~~~~~~~~R~~~i~ 172 (421)
T 1vl2_A 93 YEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALNPNLKVISPWKDPEFLAKFKGRTDLIN 172 (421)
T ss_dssp BTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHCTTSEEECGGGCHHHHHHTC--CHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
T ss_conf 67865342111158999999999997087488336524777541077779872897631585666656542011999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCHHHCCCCCEEEEEEEECCEEEEECC---
Q ss_conf 99970896756656788641572431154576324584576820100146581227999638999995024787516---
Q gi|254780234|r 161 FAEKHAIPIDKNKRGEAPFSIDTNLLHSSSEGRVLEDPSQPAPEYVYKMIVSPEEAPDTPTTIRIDFQRGDPIAING--- 237 (404)
Q Consensus 161 ya~~~gIpv~~~~~~~~~yS~D~Nlwg~S~Egg~Ledp~~~~pe~~~~~t~~p~~ap~~pe~v~I~Fe~G~PVainG--- 237 (404)
||++||||++++++ +|||+|+||||+|+|||+|||||++||+++|.||++|++||++|++|+|+|++|+||+|||
T Consensus 173 ya~~~gI~v~~~~~--~pyS~D~NLwg~S~Egg~Ledp~~~ppe~~~~~t~~p~~ap~~p~~v~I~Fe~G~PV~ing~~~ 250 (421)
T 1vl2_A 173 YAMEKGIPIKVSKK--RPYSEDENLMHISHEAGKLEDPAHIPDEDVFTWTVSPKDAPDEETLLEIHFENGIPVKVVNLKD 250 (421)
T ss_dssp HHHHHTCCCCSSCC--CSSEEEECSSCEEEESGGGGSTTSCCCGGGCCSSCCTTTSCSSCEEEEEEEETTEEEEEEETTT
T ss_pred HHHHCCCCCCCCCC--CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEECCEEEEEECCCC
T ss_conf 99975999731137--8863363620242245653445558982001356794359997732546886675589951678
Q ss_pred --EECCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf --231899999999888642163741000773202100011137378999999999986508999999999999999998
Q gi|254780234|r 238 --QVMSPEVLLEQLNQYGRCNGIGRIDIVENRFVGIKSRGVYETPGGTILLHAHRAIESISLDSGSAHLKDDLMSRYASI 315 (404)
Q Consensus 238 --~~~~~~~li~~LN~igg~~GvGr~d~vEnr~vG~KsR~vYEaPga~iL~~Ahr~LE~~~l~~~~~~~K~~~~~~~a~l 315 (404)
++++|++||++||+|||+|||||+||||||+|||||||||||||++||++|||+||++||||+++++|++++++|++|
T Consensus 251 ~~~~~~~~~li~~lN~i~g~~GiGR~d~vEnr~vG~KsR~vyEaPa~~iL~~AHr~LE~~~Ldr~~~~~K~~l~~~~a~l 330 (421)
T 1vl2_A 251 GTEKTDPLELFEYLNEVGAKNGVGRLDMVENRFIGIKSRGVYETPGATILWIAHRDLEGITMDKEVMHLRDMLAPKFAEL 330 (421)
T ss_dssp CCEECSHHHHHHHHHHHHHHTTCCEEEEEEECSSSSEEEEEEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCEECCEECCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 74118999999999998555213751014640114010542368089999999999986407699999999999999999
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCHHH
Q ss_conf 75351469899999999999723367399999906159998772783108832223015778788878547888703348
Q gi|254780234|r 316 VYQGFWFSPEREMLQALIDKSQEYVEGSITLKLYKGNVMVVGRESNKSLYSDKLVTFEDDLDAYNQSDSEGFIKLHALRL 395 (404)
Q Consensus 316 vy~G~wf~p~~~~l~a~i~~~q~~VtG~V~l~L~kG~~~v~gr~S~~sLy~~~~as~~~~~~~~~~~da~GFi~i~~l~~ 395 (404)
||+|+||||+|++|++||+++|++|||+|+|+|||||++++||+||+|||++++|||+++ +.|+|+||+|||+|+||++
T Consensus 331 vY~G~wfsP~~~~l~afi~~sq~~VtG~V~lkLykG~~~v~gr~S~~sLy~~~~as~~~~-~~~~~~da~GFi~i~~l~~ 409 (421)
T 1vl2_A 331 IYNGFWFSPEMEFLLAAFRKAQENVTGKVTVSIYKGNVMPVARYSPYSLYNPELSSMDVE-GGFDATDSKGFINIHALRL 409 (421)
T ss_dssp HHHTCTTSHHHHHHHHHHHHHHTTCCEEEEEEEETTEEEEEEEECSSSTTCC---------CCCCHHHHHHHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCHHH
T ss_conf 850345788999999999997596169999999898499998628720258623444579-9829788068899734999
Q ss_pred HHHHHCCC
Q ss_conf 98884178
Q gi|254780234|r 396 RTLARRNK 403 (404)
Q Consensus 396 ~~~~~~~k 403 (404)
|++++++|
T Consensus 410 k~~~~~~k 417 (421)
T 1vl2_A 410 KVHQLVKK 417 (421)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHHC
T ss_conf 99999855