HHsearch results for GI: 254780234 and protein with PDBid: 1xng_A
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.74 E-value=5.6e-08 Score=75.97 Aligned_cols=148 Identities=18% Similarity=0.123 Sum_probs=94.1
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCC--CCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHC
Q ss_conf 777899991477259999999987189869999945787--110689999999739807998200899999879999736
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQ--GEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRA 81 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq--~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~a 81 (404)
..|+||+++|||+||||++.+++.-.+-.|+|++++.+. +++.++++..|..+|. ++.++|...-+ +.....+..
T Consensus 24 g~k~vvvglSGGVDSav~A~La~~a~~~~v~~v~mp~~~~~~~~~~~A~~~a~~Lgi-~~~~i~~~~~~--~~~~~~~~~ 100 (268)
T 1xng_A 24 GFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSI-PYTEYSIAPYD--AIFSSHFKD 100 (268)
T ss_dssp TCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTC-CEEECCCHHHH--HHHHHHCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEEECCCHHCCHHHHHHHHHHHHHHHH-CCCCCCHHHHH--HHHHHHHHH
T ss_conf 998199978688999999999998503226787135010571557999999998330-23013279999--888875012
Q ss_pred CCCCCCCCCCC--CCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHH
Q ss_conf 86547874201--3012433599999998856892875001116821567999999858797077441006876379999
Q gi|254780234|r 82 NALYEGYYLLG--TAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIEIIAPWRHWSFKGRQDLI 159 (404)
Q Consensus 82 na~Yeg~Ypl~--tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~viaP~Rd~~~~sRe~~i 159 (404)
. .... -.-+|- -...+...|.+.|..++++ ||.---+-.++..-+-....++|+++ + ...+--
T Consensus 101 ~------~~~~~~n~~aR~-r~~~ly~~a~~~~~~v~gt-----~n~~e~~~g~~t~~gd~~~~~~Pl~~--L-~K~eVr 165 (268)
T 1xng_A 101 A------SLTRKGNFCARL-RMAFLYDYSLKSDSLVIGT-----SNKSERMLGYGTLFGDLACAINPIGE--L-FKTEVY 165 (268)
T ss_dssp C------CHHHHHHHHHHH-HHHHHHHHHHHHTCEEBCC-----CCHHHHHHTCSCTTTTTCCSEETTTT--S-CHHHHH
T ss_pred H------HHHHHHHHHHHH-HHHHHHHHHHHHCCCCCCC-----CCCCCEEECCCCCHHHHCCCCCCCCC--C-CHHHHH
T ss_conf 4------567877889998-7888888899709824688-----77543103567655542668411469--7-099999
Q ss_pred HHHHHHCCCC
Q ss_conf 9999708967
Q gi|254780234|r 160 DFAEKHAIPI 169 (404)
Q Consensus 160 ~ya~~~gIpv 169 (404)
+.|+..|||-
T Consensus 166 ~LAr~lglP~ 175 (268)
T 1xng_A 166 ELARRLNIPK 175 (268)
T ss_dssp HHHHHTTCCH
T ss_pred HHHHHCCCCH
T ss_conf 9999809969