HHsearch results for GI: 254780234 and protein with PDBid: 3dpi_A
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B}
Probab=98.54 E-value=6.1e-06 Score=61.39 Aligned_cols=153 Identities=14% Similarity=0.135 Sum_probs=87.4
Q ss_pred CCCEEEEEECCCHHHHHHHHHHH------HHCCCEEEEEEEECC--CCCHHHHHHH-HHHHCCCEEEEEECHHHHHHHHH
Q ss_conf 77789999147725999999998------718986999994578--7110689999-99973980799820089999987
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQ------VEKGLEVIVFIADLG--QGEELKIASD-KARLLGAKEVYVKDLRREFVRDF 74 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~------~e~g~eVi~~~~d~G--q~~d~~~~~~-~A~~~Ga~~~~v~D~r~ef~~~~ 74 (404)
.+++||++.|||+||||++..+. ...|+++.++++..- ...+..++++ -|..+|. +++++|.++.| +.+
T Consensus 45 g~k~vVvGlSGGVDSaV~A~L~~~a~g~~~~~g~~~~~v~~~~~~~~~~~~~da~~~~a~~lgi-~~~~i~i~~~~-~~~ 122 (285)
T 3dpi_A 45 GLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRAD-ETLTVDVKPAA-DAM 122 (285)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCS-EEEECCCHHHH-HHH
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CCEEEECCHHH-HHH
T ss_conf 9996999788889999999999999887346776637999847878865599999999985387-53055120588-888
Q ss_pred HHHHHHCC-CCCCCCCCCCCCHHHHHHHH----HHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCE-EEEEEC
Q ss_conf 99997368-65478742013012433599----9999988568928750011168215679999998587970-774410
Q gi|254780234|r 75 VFPMFRAN-ALYEGYYLLGTAIARPLIAK----YLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIE-IIAPWR 148 (404)
Q Consensus 75 i~~~I~an-a~Yeg~Ypl~tslaRplia~----~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~-viaP~R 148 (404)
+ ..+... ..+.+..+.-.++.. +.++ .+-.+|...|+-+++ -||.-.-+ ..+.++.-|.. -++|+.
T Consensus 123 ~-~~l~~~~~~~~~~~~~~~~~~N-i~aR~R~~~ly~~A~~~~~lVlg-----TgNksE~~-~Gy~tk~gD~~~di~PLg 194 (285)
T 3dpi_A 123 L-AALAAGGLAYLDHAQQDFVLGN-IKARERMIAQYAVAGARNGVVIG-----TDHAAESV-MGFFTKFGDGGADVLPLA 194 (285)
T ss_dssp H-HHHHHTTCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHTTEEEBC-----CCCHHHHH-HHHHHCCCCCCCSBCTTT
T ss_pred H-HHHHHCCCCCCCCCHHHHHHCC-HHHHHHHHHHHHHHHHCCCEEEE-----CCCCCCEE-EEEEEECCCCHHHHHHHH
T ss_conf 9-9987515657884122578615-79988878899998754988983-----79876103-653465176164798862
Q ss_pred CCCCCCHHHHHHHHHHHCCCC
Q ss_conf 068763799999999708967
Q gi|254780234|r 149 HWSFKGRQDLIDFAEKHAIPI 169 (404)
Q Consensus 149 d~~~~sRe~~i~ya~~~gIpv 169 (404)
+ + ...+-.+.|+..|+|-
T Consensus 195 d--L-~K~eVr~lAr~lglP~ 212 (285)
T 3dpi_A 195 G--L-TKRRVRALARMLGADE 212 (285)
T ss_dssp T--C-CHHHHHHHHHHTTCCH
T ss_pred C--C-CHHHHHHHHHHHCCCH
T ss_conf 7--8-9999999999848976