HHsearch results for GI: 254780234 and protein with PDBid: 3dpi_A

>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B}
Probab=98.54  E-value=6.1e-06  Score=61.39  Aligned_cols=153  Identities=14%  Similarity=0.135  Sum_probs=87.4

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHH------HHCCCEEEEEEEECC--CCCHHHHHHH-HHHHCCCEEEEEECHHHHHHHHH
Q ss_conf             77789999147725999999998------718986999994578--7110689999-99973980799820089999987
Q gi|254780234|r    4 DVKKVVLAYSGGLDTSIILKWLQ------VEKGLEVIVFIADLG--QGEELKIASD-KARLLGAKEVYVKDLRREFVRDF   74 (404)
Q Consensus         4 ~~kkVvlaySGGLDTSv~i~~L~------~e~g~eVi~~~~d~G--q~~d~~~~~~-~A~~~Ga~~~~v~D~r~ef~~~~   74 (404)
                      .+++||++.|||+||||++..+.      ...|+++.++++..-  ...+..++++ -|..+|. +++++|.++.| +.+
T Consensus        45 g~k~vVvGlSGGVDSaV~A~L~~~a~g~~~~~g~~~~~v~~~~~~~~~~~~~da~~~~a~~lgi-~~~~i~i~~~~-~~~  122 (285)
T 3dpi_A           45 GLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRAD-ETLTVDVKPAA-DAM  122 (285)
T ss_dssp             TCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCS-EEEECCCHHHH-HHH
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC-CCEEEECCHHH-HHH
T ss_conf             9996999788889999999999999887346776637999847878865599999999985387-53055120588-888


Q ss_pred             HHHHHHCC-CCCCCCCCCCCCHHHHHHHH----HHHHHHHHCCCCEEECHHHCCCCHHHHHHHHHHHHCCCCE-EEEEEC
Q ss_conf             99997368-65478742013012433599----9999988568928750011168215679999998587970-774410
Q gi|254780234|r   75 VFPMFRAN-ALYEGYYLLGTAIARPLIAK----YLVDIANETGADAIAHGSTGKGNDQVRFELSAYSLNSDIE-IIAPWR  148 (404)
Q Consensus        75 i~~~I~an-a~Yeg~Ypl~tslaRplia~----~lv~~a~~~ga~~iaHG~TgkGNDQvRFe~~~~~l~P~l~-viaP~R  148 (404)
                      + ..+... ..+.+..+.-.++.. +.++    .+-.+|...|+-+++     -||.-.-+ ..+.++.-|.. -++|+.
T Consensus       123 ~-~~l~~~~~~~~~~~~~~~~~~N-i~aR~R~~~ly~~A~~~~~lVlg-----TgNksE~~-~Gy~tk~gD~~~di~PLg  194 (285)
T 3dpi_A          123 L-AALAAGGLAYLDHAQQDFVLGN-IKARERMIAQYAVAGARNGVVIG-----TDHAAESV-MGFFTKFGDGGADVLPLA  194 (285)
T ss_dssp             H-HHHHHTTCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHTTEEEBC-----CCCHHHHH-HHHHHCCCCCCCSBCTTT
T ss_pred             H-HHHHHCCCCCCCCCHHHHHHCC-HHHHHHHHHHHHHHHHCCCEEEE-----CCCCCCEE-EEEEEECCCCHHHHHHHH
T ss_conf             9-9987515657884122578615-79988878899998754988983-----79876103-653465176164798862


Q ss_pred             CCCCCCHHHHHHHHHHHCCCC
Q ss_conf             068763799999999708967
Q gi|254780234|r  149 HWSFKGRQDLIDFAEKHAIPI  169 (404)
Q Consensus       149 d~~~~sRe~~i~ya~~~gIpv  169 (404)
                      +  + ...+-.+.|+..|+|-
T Consensus       195 d--L-~K~eVr~lAr~lglP~  212 (285)
T 3dpi_A          195 G--L-TKRRVRALARMLGADE  212 (285)
T ss_dssp             T--C-CHHHHHHHHHHTTCCH
T ss_pred             C--C-CHHHHHHHHHHHCCCH
T ss_conf             7--8-9999999999848976