HHsearch results for GI: 254780234 and protein with PDBid: 3k32_A
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.44 E-value=3.1e-12 Score=106.56 Aligned_cols=146 Identities=23% Similarity=0.290 Sum_probs=102.7
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHCCC
Q ss_conf 77789999147725999999998718986999994578711068999999973980799820089999987999973686
Q gi|254780234|r 4 DVKKVVLAYSGGLDTSIILKWLQVEKGLEVIVFIADLGQGEELKIASDKARLLGAKEVYVKDLRREFVRDFVFPMFRANA 83 (404)
Q Consensus 4 ~~kkVvlaySGGLDTSv~i~~L~~e~g~eVi~~~~d~Gq~~d~~~~~~~A~~~Ga~~~~v~D~r~ef~~~~i~~~I~ana 83 (404)
++.||++|||||+|||+++.+++ +.|++|+++++|.|+.++.+.+++.|..+|. +++++++.+++.++.+..+++++
T Consensus 5 k~~kv~V~~SGG~DS~~la~ll~-~~g~~v~~v~~~~~~~~~~~~a~~~a~~lgi-~~~~~~~~~~~~~~~~~~~~~~~- 81 (203)
T 3k32_A 5 KLMDVHVLFSGGKDSSLSAVILK-KLGYNPHLITINFGVIPSYKLAEETAKILGF-KHKVITLDRKIVEKAADMIIEHK- 81 (203)
T ss_dssp -CEEEEEECCCSHHHHHHHHHHH-HTTEEEEEEEEECSSSCTTHHHHHHHHHHTC-EEEEEECCTHHHHHHHHHHHHHS-
T ss_pred CCCEEEEEECCCHHHHHHHHHHH-HCCCCEEEEEEECCCCHHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHHHCC-
T ss_conf 33708999558789999999999-7199769999879951478999999999699-71898578999988999998469-
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECHHHCCCCHHHHH--HHHHHHHC--CCCEEEEEECCCCCCCHHHHH
Q ss_conf 54787420130124335999999988568928750011168215679--99999858--797077441006876379999
Q gi|254780234|r 84 LYEGYYLLGTAIARPLIAKYLVDIANETGADAIAHGSTGKGNDQVRF--ELSAYSLN--SDIEIIAPWRHWSFKGRQDLI 159 (404)
Q Consensus 84 ~Yeg~Ypl~tslaRplia~~lv~~a~~~ga~~iaHG~TgkGNDQvRF--e~~~~~l~--P~l~viaP~Rd~~~~sRe~~i 159 (404)
+|... .|.+ -...+ .+.+.|+++|++|-+ .+||+.. -.-.+.+. .+..++.|.- ++ ++++..
T Consensus 82 -----~~~~~--~~~~-~~~~~-~~~a~~~~~i~tGh~--~dD~~e~~~~~~~~~~~~~~~~~~~rPL~--~~-~k~ei~ 147 (203)
T 3k32_A 82 -----YPGPA--IQYV-HKTVL-EILADEYSILADGTR--RDDRVPKLSYSEIQSLEMRKNIQYITPLM--GF-GYKTLR 147 (203)
T ss_dssp -----SSHHH--HHHH-HHHHH-HHHTTTCSEEECCCC--TTCCSSCCCHHHHHHHHHHHTCEEECGGG--GC-CHHHHH
T ss_pred -----CHHHH--HHHH-HHHHH-HHHHCCCCEEEECCC--CHHHHCCCHHHHHCCCCHHHHHHCCCCCC--CC-CHHHHH
T ss_conf -----82499--9999-99999-999669999997288--07775412087714520221000025335--98-999999
Q ss_pred HHHHHHC
Q ss_conf 9999708
Q gi|254780234|r 160 DFAEKHA 166 (404)
Q Consensus 160 ~ya~~~g 166 (404)
+||+++.
T Consensus 148 ~~a~~~~ 154 (203)
T 3k32_A 148 HLASEFF 154 (203)
T ss_dssp HHHHHHE
T ss_pred HHHHHCC
T ss_conf 9999708