HHsearch results for GI: 254780234 and protein with PDBid: 3nbm_A
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=91.08 E-value=0.85 Score=24.46 Aligned_cols=65 Identities=15% Similarity=0.108 Sum_probs=45.7
Q ss_pred CCCCCEEEEEECCCHHHHHHHHHHHH---HCCCEEEEEEEECCCCC-----------------HHHHHHHHHHHCCCEEE
Q ss_conf 87777899991477259999999987---18986999994578711-----------------06899999997398079
Q gi|254780234|r 2 SRDVKKVVLAYSGGLDTSIILKWLQV---EKGLEVIVFIADLGQGE-----------------ELKIASDKARLLGAKEV 61 (404)
Q Consensus 2 ~~~~kkVvlaySGGLDTSv~i~~L~~---e~g~eVi~~~~d~Gq~~-----------------d~~~~~~~A~~~Ga~~~ 61 (404)
++ .=||+|+.+||.-||..+.-+++ ++|.++.--.+..++-+ -.+++++.+...|+ ++
T Consensus 4 ~k-~~kIlL~C~~GmSSsll~~km~~~a~~~~~~~~v~A~~~~~~~~~~~~~DviLL~PQv~~~~~~i~~~~~~~~i-pv 81 (108)
T 3nbm_A 4 SK-ELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGI-QI 81 (108)
T ss_dssp -C-CEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHHHTTTTC-EE
T ss_pred CC-CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHCCC-CE
T ss_conf 76-34699997999759999999999999769978999953899998864289999866799999999999877399-28
Q ss_pred EEECHHH
Q ss_conf 9820089
Q gi|254780234|r 62 YVKDLRR 68 (404)
Q Consensus 62 ~v~D~r~ 68 (404)
.++|..+
T Consensus 82 ~~I~~~~ 88 (108)
T 3nbm_A 82 VATRGME 88 (108)
T ss_dssp EECCHHH
T ss_pred EEECHHH
T ss_conf 8728787