RPSBLAST alignment for GI: 254780234 and conserved domain: COG0482
>gnl|CDD|30830 COG0482, TrmU, Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]. Length = 356
Score = 42.5 bits (100), Expect = 2e-04
Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 24/129 (18%)
Query: 6 KKVVLAYSGGLDTSIILKWLQVEKGLEVI-VFIA---DLGQG-----EELKIASDKARLL 56
KKV++ SGG+D+S+ L+ E+G EVI +F+ + G G E+L+ A A L
Sbjct: 4 KKVLVGMSGGVDSSVAAYLLK-EQGYEVIGLFMKNWDEDGGGGCCSEEDLRDAERVADQL 62
Query: 57 GAKEVYVKDLRREFVRDFVFPMFRANALYEGYYLLG-TAIA-----RPLIAKYLVDIANE 110
G +YV D +EF + VF F A Y G T + + K L+D A E
Sbjct: 63 GIP-LYVVDFEKEF-WNKVFEYFLA------EYKAGKTPNPCILCNKEIKFKALLDYAKE 114
Query: 111 TGADAIAHG 119
GAD IA G
Sbjct: 115 LGADYIATG 123