RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddB 
           21,608 sequences; 5,994,473 total letters

Searching..................................................done

Query= gi|254780235|ref|YP_003064648.1| hypothetical protein
CLIBASIA_00600 [Candidatus Liberibacter asiaticus str. psy62]
         (74 letters)



>gnl|CDD|183003 PRK11160, PRK11160, cysteine/glutathione ABC transporter
           membrane/ATP-binding component; Reviewed.
          Length = 574

 Score = 25.2 bits (56), Expect = 4.6
 Identities = 6/21 (28%), Positives = 11/21 (52%), Gaps = 4/21 (19%)

Query: 51  CLLLC----VCGMLWFSSSGI 67
            ++L     V  MLW ++ G+
Sbjct: 250 LMILANGLTVVLMLWLAAGGV 270


>gnl|CDD|185245 PRK15347, PRK15347, two component system sensor kinase SsrA;
          Provisional.
          Length = 921

 Score = 24.6 bits (54), Expect = 6.0
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query: 48 KLVCLLLCVCGMLWFSSSGIFAYLN 72
          +L  LL     ++W  S    AY +
Sbjct: 12 RLTLLLGLTLIIIWLLSVATTAYFS 36


  Database: CddB
    Posted date:  Feb 4, 2011  9:54 PM
  Number of letters in database: 5,994,473
  Number of sequences in database:  21,608
  
Lambda     K      H
   0.338    0.148    0.494 

Gapped
Lambda     K      H
   0.267   0.0597    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 1,166,232
Number of extensions: 58339
Number of successful extensions: 193
Number of sequences better than 10.0: 1
Number of HSP's gapped: 193
Number of HSP's successfully gapped: 11
Length of query: 74
Length of database: 5,994,473
Length adjustment: 44
Effective length of query: 30
Effective length of database: 5,043,721
Effective search space: 151311630
Effective search space used: 151311630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 50 (23.3 bits)