RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780235|ref|YP_003064648.1| hypothetical protein CLIBASIA_00600 [Candidatus Liberibacter asiaticus str. psy62] (74 letters) >gnl|CDD|183003 PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed. Length = 574 Score = 25.2 bits (56), Expect = 4.6 Identities = 6/21 (28%), Positives = 11/21 (52%), Gaps = 4/21 (19%) Query: 51 CLLLC----VCGMLWFSSSGI 67 ++L V MLW ++ G+ Sbjct: 250 LMILANGLTVVLMLWLAAGGV 270 >gnl|CDD|185245 PRK15347, PRK15347, two component system sensor kinase SsrA; Provisional. Length = 921 Score = 24.6 bits (54), Expect = 6.0 Identities = 7/25 (28%), Positives = 11/25 (44%) Query: 48 KLVCLLLCVCGMLWFSSSGIFAYLN 72 +L LL ++W S AY + Sbjct: 12 RLTLLLGLTLIIIWLLSVATTAYFS 36 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.338 0.148 0.494 Gapped Lambda K H 0.267 0.0597 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 1,166,232 Number of extensions: 58339 Number of successful extensions: 193 Number of sequences better than 10.0: 1 Number of HSP's gapped: 193 Number of HSP's successfully gapped: 11 Length of query: 74 Length of database: 5,994,473 Length adjustment: 44 Effective length of query: 30 Effective length of database: 5,043,721 Effective search space: 151311630 Effective search space used: 151311630 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (21.8 bits) S2: 50 (23.3 bits)